Volume 11, Issue 9 | September 2001

INSIGHT/OUTLOOK
- - Assembling Puzzles from Preassembled Blocks
    Pavel A. Pevzner
    First Published September 1, 2001
  - Interrelating Different Types of Genomic Data, from Proteome to Secretome: 'Oming in on Function
    Dov Greenbaum
    Nicholas M. Luscombe
    Ronald Jansen
    Jiang Qian
    Mark Gerstein
    First Published September 1, 2001
  - Looking at Old Tools in New Ways: Using Knockouts as Congenics to Study QTLs
    Jeremy Peirce
    First Published September 1, 2001
ARTICLES
- - A Novel Method of Gene Transcript Profiling in Airway Biopsy Homogenates Reveals Increased Expression of a Na+-K+-Cl− Cotransporter (NKCC1) in Asthmatic Subjects
    Gregory M. Dolganov
    Prescott G. Woodruff
    Alexander A. Novikov
    Yifan Zhang
    Ronald E. Ferrando
    First Published August 16, 2001
  - A Proteomic View on Genome-Based Signal Peptide Predictions
    Haike Antelmann
    Harold Tjalsma
    Birgit Voigt
    Steffen Ohlmeier
    Sierd Bron
    First Published September 1, 2001
LETTERS
- - Functional Versatility and Molecular Diversity of the Metabolic Map of Escherichia coli
    Sophia Tsoka
    Christos A. Ouzounis
    First Published August 16, 2001
  - A Novel γ2-Herpesvirus of the Rhadinovirus 2 Lineage in Chimpanzees
    Vincent Lacoste
    Philippe Mauclère
    Guy Dubreuil
    John Lewis
    Marie-Claude Georges-Courbot
    First Published September 1, 2001
  - Identification of Alternate Polyadenylation Sites and Analysis of their Tissue Distribution Using EST Data
    Emmanuel Beaudoing
    Daniel Gautheret
    First Published August 16, 2001
  - Drosophila Euchromatic LTR Retrotransposons are Much Younger Than the Host Species in Which They Reside
    Nathan J. Bowen
    John F. McDonald
    First Published August 16, 2001
METHODS
- - Assembly of the Working Draft of the Human Genome with GigAssembler
    W. James Kent
    David Haussler
    First Published August 16, 2001
  - Mapping of Quantitative Trait Loci with Knockout/Congenic Strains
    Valerie J. Bolivar
    Melloni N. Cook
    Lorraine Flaherty
    First Published September 1, 2001
  - Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method
    Yulan Piao
    Naomi T. Ko
    Meng K. Lim
    Minoru S.H. Ko
    First Published September 1, 2001
  - A Predictive Model for Regulatory Sequences Directing Liver-Specific Transcription
    William Krivan
    Wyeth W. Wasserman
    First Published August 16, 2001
  - cis Element/Transcription Factor Analysis (cis/TF): A Method for Discovering Transcription Factor/cis Element Relationships
    Kenneth Birnbaum
    Philip N. Benfey
    Dennis E. Shasha
    First Published August 16, 2001
  - SGP-1: Prediction and Validation of Homologous Genes Based on Sequence Alignments
    Thomas Wiehe
    Steffi Gebauer-Jung
    Thomas Mitchell-Olds
    Roderic Guigó
    First Published September 1, 2001
  - Shotgun Optical Maps of the Whole Escherichia coli O157:H7 Genome
    Alex Lim
    Eileen T. Dimalanta
    Konstantinos D. Potamousis
    Galex Yen
    Jennifer Apodoca
    Chunhong Tao Jieyi Lin Rong Qi John Skiadas Arvind Ramanathan Nicole T. Perna Guy Plunkett Valerie Burland Bob Mau Jeremiah Hackett
    ...[+10 authors]...,
    Frederick R. Blattner
    Thomas S. Anantharaman
    Bhubaneswar Mishra
    David C. Schwartz
    First Published August 16, 2001
RESOURCES
- - An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library
    Matthew D. Clark
    Steffen Hennig
    Ralf Herwig
    Sandy W. Clifton
    Marco A. Marra
    First Published August 16, 2001
  - Argus—A New Database System for Web-Based Analysis of Multiple Microarray Data Sets
    Jason Comander
    Griffin M. Weber
    Michael A. Gimbrone
    Guillermo García-Cardeña
    First Published September 1, 2001

Table of Contents

Volume 11, Issue 9 | September 2001

INSIGHT/OUTLOOK

Assembling Puzzles from Preassembled Blocks

Interrelating Different Types of Genomic Data, from Proteome to Secretome: 'Oming in on Function

Looking at Old Tools in New Ways: Using Knockouts as Congenics to Study QTLs

ARTICLES

A Novel Method of Gene Transcript Profiling in Airway Biopsy Homogenates Reveals Increased Expression of a Na+-K+-Cl− Cotransporter (NKCC1) in Asthmatic Subjects

A Proteomic View on Genome-Based Signal Peptide Predictions

LETTERS

Functional Versatility and Molecular Diversity of the Metabolic Map of Escherichia coli

A Novel γ2-Herpesvirus of the Rhadinovirus 2 Lineage in Chimpanzees

Identification of Alternate Polyadenylation Sites and Analysis of their Tissue Distribution Using EST Data

Drosophila Euchromatic LTR Retrotransposons are Much Younger Than the Host Species in Which They Reside

METHODS

Assembly of the Working Draft of the Human Genome with GigAssembler

Mapping of Quantitative Trait Loci with Knockout/Congenic Strains

Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method

A Predictive Model for Regulatory Sequences Directing Liver-Specific Transcription

cis Element/Transcription Factor Analysis (cis/TF): A Method for Discovering Transcription Factor/cis Element Relationships

SGP-1: Prediction and Validation of Homologous Genes Based on Sequence Alignments

Shotgun Optical Maps of the Whole Escherichia coli O157:H7 Genome

RESOURCES

An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library

Argus—A New Database System for Web-Based Analysis of Multiple Microarray Data Sets

Table of Contents

Volume 11, Issue 9 | September 2001

Share this issue

INSIGHT/OUTLOOK

ARTICLES

LETTERS

METHODS

RESOURCES