Volume 11, Issue 7 | July 2001

INSIGHT/OUTLOOK
- - Identifying Functional Elements by Comparative DNA Sequence Analysis
    Martin Tompa
    First Published July 1, 2001
  - Microsatellites in the Eukaryotic DNA Mismatch Repair Genes as Modulators of Evolutionary Mutation Rate
    Dong Kyung Chang
    David Metzgar
    Christopher Wills
    C. Richard Boland
    First Published July 1, 2001
  - Systematic Analysis of DNA Microarray Data: Ordering and Interpreting Patterns of Gene Expression
    Paul J. Planet
    Rob DeSalle
    Mark Siddall
    Timothy Bael
    Indra Neil Sarkar
    First Published July 1, 2001
REVIEW
- - The Human ATP-Binding Cassette (ABC) Transporter Superfamily
    Michael Dean
    Andrey Rzhetsky
    Rando Allikmets
    First Published January 18, 2001
REPORT
- - Conservation of Microstructure between a Sequenced Region of the Genome of Rice and Multiple Segments of the Genome of Arabidopsis thaliana
    Klaus Mayer
    George Murphy
    Renato Tarchini
    Rolf Wambutt
    Guido Volckaert
    Thomas Pohl Andreas Düsterhöft Willem Stiekema Karl-Dieter Entian Nancy Terryn Kai Lemcke Dirk Haase Caroline R. Hall Anne-Marie van Dodeweerd
    ...[+9 authors]...,
    Scott V. Tingey
    Hans-Werner Mewes
    Michael W. Bevan
    Ian Bancroft
    First Published June 12, 2001
ARTICLES
- - Surveying Saccharomyces Genomes to Identify Functional Elements by Comparative DNA Sequence Analysis
    Paul F. Cliften
    LaDeana W. Hillier
    Lucinda Fulton
    Tina Graves
    Tracie Miner
    First Published July 1, 2001
  - Phylogenetic Analysis of Ribonuclease H Domains Suggests a Late, Chimeric Origin of LTR Retrotransposable Elements and Retroviruses
    Harmit S. Malik
    Thomas H. Eickbush
    First Published July 1, 2001
LETTERS
- - Temporal Gene Regulation During HIV-1 Infection of Human CD4+ T Cells
    Jacques Corbeil
    Dennis Sheeter
    Davide Genini
    Steffney Rought
    Lorenzo Leoni
    Pinyi Du Mark Ferguson Daniel R. Masys John B. Welsh J. Lynn Fink Roman Sasik
    ...[+6 authors]...,
    David Huang
    Jorg Drenkow
    Douglas D. Richman
    Thomas Gingeras
    First Published June 12, 2001
  - The Evolutionary Chromosome Translocation 4;19 in Gorilla gorilla is Associated with Microduplication of the Chromosome Fragment Syntenic to Sequences Surrounding the Human Proximal CMT1A-REP
    Pawel Stankiewicz
    Sung-Sup Park
    Ken Inoue
    James R. Lupski
    First Published July 1, 2001
  - The Repertoire of Na,K-ATPase α and β Subunit Genes Expressed in the Zebrafish, Danio rerio
    S. Johannes R. Rajarao
    Victor A. Canfield
    Manzoor-Ali P.K. Mohideen
    Yi-Lin Yan
    John H. Postlethwait
    First Published July 1, 2001
  - Linkage Disequilibrium Between Microsatellite Markers Extends Beyond 1 cM on Chromosome 20 in Finns
    Karen L. Mohlke
    Ethan M. Lange
    Timo T. Valle
    Soumitra Ghosh
    Victoria L. Magnuson
    Kaisa Silander Richard M. Watanabe Peter S. Chines
    ...[+3 authors]...,
    Richard N. Bergman
    Jaakko Tuomilehto
    Francis S. Collins
    Michael Boehnke
    First Published July 1, 2001
METHODS
- - An Efficient and Robust Statistical Modeling Approach to Discover Differentially Expressed Genes Using Genomic Expression Profiles
    Jeffrey G. Thomas
    James M. Olson
    Stephen J. Tapscott
    Lue Ping Zhao
    First Published July 1, 2001
  - Predicting Splice Variant from DNA Chip Expression Data
    Gang Ken Hu
    Steven J Madore
    Brian Moldover
    Tim Jatkoe
    David Balaban
    First Published July 1, 2001
  - Phenotype MicroArrays for High-Throughput Phenotypic Testing and Assay of Gene Function
    Barry R. Bochner
    Peter Gadzinski
    Eugenia Panomitros
    First Published July 1, 2001
  - Arrays of Arrays for High-Throughput Gene Expression Profiling
    Patrick P. Zarrinkar
    James K. Mainquist
    Matthew Zamora
    David Stern
    John B. Welsh
    First Published June 12, 2001
  - High-Throughput Genotyping with Single Nucleotide Polymorphisms
    Koustubh Ranade
    Mau-Song Chang
    Chih-Tai Ting
    Dee Pei
    Chin-Fu Hsiao
    Michael Olivier Robert Pesich Joan Hebert Yii-Der I. Chen Victor J. Dzau David Curb
    ...[+6 authors]...,
    Richard Olshen
    Neil Risch
    David R. Cox
    David Botstein
    First Published June 12, 2001
  - High-Throughput Plasmid Purification for Capillary Sequencing
    Christopher J. Elkin
    Paul M. Richardson
    H. Matthew Fourcade
    Nancy M. Hammon
    Martin J. Pollard
    First Published July 1, 2001
RESOURCES
- - An Enhanced Linkage Map of the Sheep Genome Comprising More Than 1000 Loci
    Jillian F. Maddox
    Kizanne P. Davies
    Allan M. Crawford
    Dennis J. Hulme
    Daniel Vaiman
    Edmond P. Cribiu Bradley A. Freking Ken J. Beh Noelle E. Cockett Nina Kang Christopher D. Riffkin Roger Drinkwater Stephen S. Moore Ken G. Dodds Joanne M. Lumsden Tracey C. van Stijn Sin H. Phua David L. Adelson Heather R. Burkin Judith E. Broom Johannes Buitkamp Lisa Cambridge William T. Cushwa Emily Gerard Susan M. Galloway Blair Harrison Rachel J. Hawken Stefan Hiendleder Hannah M. Henry Juan F. Medrano
    ...[+25 authors]...,
    Korena A. Paterson
    Laurent Schibler
    Roger T. Stone
    Beryl van Hest
    First Published June 12, 2001
  - A Sequence-Based Integrated Map of Chromosome 22
    William J. Tapper
    Newton E. Morton
    Ian Dunham
    Xiayi Ke
    Andrew Collins
    First Published July 1, 2001
  - Massive Sequence Comparisons as a Help in Annotating Genomic Sequences
    Alexandra Louis
    Emmanuelle Ollivier
    Jean-Christophe Aude
    Jean-Loup Risler
    First Published June 12, 2001
  - Toward High-Throughput Genotyping: Dynamic and Automatic Software for Manipulating Large-Scale Genotype Data Using Fluorescently Labeled Dinucleotide Markers
    Jin-Long Li
    Hongyi Deng
    Dong-Bing Lai
    Fuhua Xu
    Jian Chen
    First Published July 1, 2001
ERRATA
- - Errata for vol. 11, p. 645
    First Published July 1, 2001
  - Errata for vol. 11, p. 667
    First Published July 1, 2001
  - Errata for vol. 11, p. 677
    First Published July 1, 2001
  - Errata for vol. 11, p. 817
    First Published July 1, 2001
  - Errata for vol. 11, p. 901
    First Published July 1, 2001

Table of Contents

Volume 11, Issue 7 | July 2001

INSIGHT/OUTLOOK

Identifying Functional Elements by Comparative DNA Sequence Analysis

Microsatellites in the Eukaryotic DNA Mismatch Repair Genes as Modulators of Evolutionary Mutation Rate

Systematic Analysis of DNA Microarray Data: Ordering and Interpreting Patterns of Gene Expression

REVIEW

The Human ATP-Binding Cassette (ABC) Transporter Superfamily

REPORT

Conservation of Microstructure between a Sequenced Region of the Genome of Rice and Multiple Segments of the Genome of Arabidopsis thaliana

ARTICLES

Surveying Saccharomyces Genomes to Identify Functional Elements by Comparative DNA Sequence Analysis

Phylogenetic Analysis of Ribonuclease H Domains Suggests a Late, Chimeric Origin of LTR Retrotransposable Elements and Retroviruses

LETTERS

Temporal Gene Regulation During HIV-1 Infection of Human CD4+ T Cells

The Evolutionary Chromosome Translocation 4;19 in Gorilla gorilla is Associated with Microduplication of the Chromosome Fragment Syntenic to Sequences Surrounding the Human Proximal CMT1A-REP

The Repertoire of Na,K-ATPase α and β Subunit Genes Expressed in the Zebrafish, Danio rerio

Linkage Disequilibrium Between Microsatellite Markers Extends Beyond 1 cM on Chromosome 20 in Finns

METHODS

An Efficient and Robust Statistical Modeling Approach to Discover Differentially Expressed Genes Using Genomic Expression Profiles

Predicting Splice Variant from DNA Chip Expression Data

Phenotype MicroArrays for High-Throughput Phenotypic Testing and Assay of Gene Function

Arrays of Arrays for High-Throughput Gene Expression Profiling

High-Throughput Genotyping with Single Nucleotide Polymorphisms

High-Throughput Plasmid Purification for Capillary Sequencing

RESOURCES

An Enhanced Linkage Map of the Sheep Genome Comprising More Than 1000 Loci

A Sequence-Based Integrated Map of Chromosome 22

Massive Sequence Comparisons as a Help in Annotating Genomic Sequences

Toward High-Throughput Genotyping: Dynamic and Automatic Software for Manipulating Large-Scale Genotype Data Using Fluorescently Labeled Dinucleotide Markers

ERRATA

Errata for vol. 11, p. 645

Errata for vol. 11, p. 667

Errata for vol. 11, p. 677

Errata for vol. 11, p. 817

Errata for vol. 11, p. 901

Table of Contents

Volume 11, Issue 7 | July 2001

Share this issue

INSIGHT/OUTLOOK

REVIEW

REPORT

ARTICLES

LETTERS

METHODS

RESOURCES

ERRATA