Filter results by:
Publication date
Include options

Your search for returned 6,373 results

Order by:
Show per page
Perspective

Translating cancer ‘omics’ to improved outcomes

  • First Published February 1, 2012
Perspective

Translational genomics: The challenge of developing cancer biomarkers

  • First Published February 1, 2012
Research

Microevolution of extensively drug-resistant tuberculosis in Russia

  • First Published January 31, 2012
Research

Retrotransposon profiling of RNA polymerase III initiation sites

  • First Published January 27, 2012
Research

Evolutionary rate covariation reveals shared functionality and coexpression of genes

  • First Published January 27, 2012
Research

A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver

  • First Published January 27, 2012
Resource

Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs

  • First Published January 26, 2012
Method

Unified modeling of gene duplication, loss, and coalescence using a locus tree

  • First Published January 23, 2012
Method

Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture

  • First Published January 20, 2012
Research

The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients

  • First Published January 20, 2012
Research

An ancient genomic regulatory block conserved across bilaterians and its dismantling in tetrapods by retrogene replacement

  • First Published January 10, 2012
Research

Saccharomyces cerevisiae Ty1 retrotransposon" > A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon

  • First Published January 4, 2012
Research

Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots

  • First Published January 4, 2012
Method

Cell-type-specific nuclei purification from whole animals for genome-wide expression and chromatin profiling

  • First Published January 4, 2012
Research

Comparative RNA sequencing reveals substantial genetic variation in endangered primates

  • First Published December 29, 2011
Method

Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis

  • First Published December 29, 2011
Research

The human phosphotyrosine signaling network: Evolution and hotspots of hijacking in cancer

  • First Published December 22, 2011
Research

Promoter architecture of mouse olfactory receptor genes

  • First Published December 22, 2011
Research

KIF5B and RET gene fusion in lung adenocarcinoma revealed from whole-genome and transcriptome sequencing" > A transforming KIF5B and RET gene fusion in lung adenocarcinoma revealed from whole-genome and transcriptome sequencing

  • First Published December 22, 2011
Research

Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent

  • First Published December 19, 2011
Research

Whole genome sequencing of matched primary and metastatic acral melanomas

  • First Published December 19, 2011
Method

Targeted chromosomal duplications and inversions in the human genome using zinc finger nucleases

  • First Published December 19, 2011
Research

Cooperation between Polycomb and androgen receptor during oncogenic transformation

  • First Published December 16, 2011
Resource

Efficient de novo assembly of large genomes using compressed data structures

  • First Published December 7, 2011
Research

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

  • First Published December 7, 2011
Research

MLH1 haploinsufficiency and complete deficiency" > Whole-exome sequencing of human pancreatic cancers and characterization of genomic instability caused by MLH1 haploinsufficiency and complete deficiency

  • First Published December 7, 2011
Research

SLCO1B1 variation and methotrexate disposition" > Rare versus common variants in pharmacogenetics: SLCO1B1 variation and methotrexate disposition

  • First Published December 6, 2011
Resource

GAGE: A critical evaluation of genome assemblies and assembly algorithms

  • First Published December 6, 2011
Research

Disclosing pathogenic genetic variants to research participants: Quantifying an emerging ethical responsibility

  • First Published December 6, 2011
Author Index

Author Index, Volume 21, 2011

  • First Published December 1, 2011
Reviewer Index

Reviewer Index, Volume 21, 2011

  • First Published December 1, 2011
Research

Drosophila melanogaster" > Genome-wide analysis of retrogene polymorphisms in Drosophila melanogaster

  • First Published December 1, 2011
Research

Sequence shortening in the rodent ancestor

  • First Published November 29, 2011
Research

Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution

  • First Published November 29, 2011
Method

Genome-wide detection of natural selection in African Americans pre- and post-admixture

  • First Published November 29, 2011
Method

Transposase mediated construction of RNA-seq libraries

  • First Published November 29, 2011
Method

Estimation of alternative splicing variability in human populations

  • First Published November 23, 2011
Resource

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

  • First Published November 22, 2011
Resource

High-resolution mapping of open chromatin in the rice genome

  • First Published November 22, 2011
Research

Tissue type is a major modifier of the 5-hydroxymethylcytosine content of human genes

  • First Published November 21, 2011
Research

DMD gene" > Aberrant firing of replication origins potentially explains intragenic nonrecurrent rearrangements within genes, including the human DMD gene

  • First Published November 16, 2011
Research

Interlocus gene conversion events introduce deleterious mutations into at least 1% of human genes associated with inherited disease

  • First Published November 16, 2011
Research

Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells

  • First Published November 16, 2011
Research

Developmental control of gene copy number by repression of replication initiation and fork progression

  • First Published November 16, 2011
Method

Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA

  • First Published November 16, 2011
Method

Calling amplified haplotypes in next generation tumor sequence data

  • First Published November 16, 2011
Research

Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription

  • First Published November 15, 2011
Research

Lactococcus lactis can be reproduced by experimental evolution" > Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution

  • First Published November 11, 2011
Resource

Simultaneous structural variation discovery among multiple paired-end sequenced genomes

  • First Published November 2, 2011
Research

Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells

  • First Published October 31, 2011
Research

Locus- and domain-dependent control of DNA methylation at mouse B1 retrotransposons during male germ cell development

  • First Published October 31, 2011
Research

Leishmania" > Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

  • First Published October 28, 2011
Research

Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance" > Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance

  • First Published October 28, 2011
Research

Fusobacterium with colorectal carcinoma" > Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

  • First Published October 18, 2011
Research

Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma" > Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma

  • First Published October 18, 2011
Research

Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters

  • First Published October 18, 2011
Research

PRDM9 coincides with stabilization of the recombination landscape in the dog genome" > Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome

  • First Published October 17, 2011
Research

Drosophila and other metazoa" > Evidence of abundant stop codon readthrough in Drosophila and other metazoa

  • First Published October 12, 2011
Method

Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes

  • First Published October 12, 2011
Method

New families of human regulatory RNA structures identified by comparative analysis of vertebrate genomes

  • First Published October 12, 2011
Research

Mycosphaerella graminicola and its wild sister species" > The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species

  • First Published October 12, 2011
Method

Estimation of rearrangement phylogeny for cancer genomes

  • First Published October 12, 2011
Research

A matter of life or death: How microsatellites emerge in and vanish from the human genome

  • First Published October 12, 2011
Research

Unique DNA methylome profiles in CpG island methylator phenotype colon cancers

  • First Published October 11, 2011
Research

Genomic analysis of circulating cell-free DNA infers breast cancer dormancy

  • First Published October 11, 2011
Research

Changes in exon–intron structure during vertebrate evolution affect the splicing pattern of exons

  • First Published October 5, 2011
Research

Populus" > Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus

  • First Published October 5, 2011
Method

Accurate identification of A-to-I RNA editing in human by transcriptome sequencing

  • First Published September 29, 2011
Research

Late-replicating heterochromatin is characterized by decreased cytosine methylation in the human genome

  • First Published September 28, 2011
Research

Extensive variation and low heritability of DNA methylation identified in a twin study

  • First Published September 26, 2011
Research

Genomic basis of endosymbiont-conferred protection against an insect parasitoid

  • First Published September 23, 2011
Research

Post-transcriptional exon shuffling events in humans can be evolutionarily conserved and abundant

  • First Published September 23, 2011
Resource

Arabidopsis" > High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis

  • First Published September 22, 2011
Research

Drosophila predicts DNA methylation and CpG landscapes in other invertebrates" > Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates

  • First Published September 22, 2011
Method

Integrating genetic and gene expression evidence into genome-wide association analysis of gene sets

  • First Published September 22, 2011
Research

A genomic model of condition-specific nucleosome behavior explains transcriptional activity in yeast

  • First Published September 19, 2011
Resource

Assemblathon 1: A competitive assessment of de novo short read assembly methods

  • First Published September 16, 2011
Method

Mutual exclusivity analysis identifies oncogenic network modules

  • First Published September 9, 2011
Research

Phyloepigenomic comparison of great apes reveals a correlation between somatic and germline methylation states

  • First Published September 9, 2011
Research

Widespread signatures of recent selection linked to nucleosome positioning in the human lineage

  • First Published September 8, 2011
Resource

Differential expression in RNA-seq: A matter of depth

  • First Published September 8, 2011
Method

A metabolomic and systems biology perspective on the brain of the Fragile X syndrome mouse model

  • First Published September 7, 2011
Method

Characterization of complex chromosomal rearrangements by targeted capture and next-generation sequencing

  • First Published September 2, 2011
Research

Genome-wide analysis distinguishes hyperglycemia regulated epigenetic signatures of primary vascular cells

  • First Published September 2, 2011
Research

Homozygosity mapping and targeted genomic sequencing reveal the gene responsible for cerebellar hypoplasia and quadrupedal locomotion in a consanguineous kindred

  • First Published September 1, 2011
Erratum

Erratum

  • First Published September 1, 2011
Research

The human gut virome: Inter-individual variation and dynamic response to diet

  • First Published August 31, 2011
Method

Efficient cross-species capture hybridization and next-generation sequencing of mitochondrial genomes from noninvasively sampled museum specimens

  • First Published August 31, 2011
Review

What fraction of the human genome is functional?

  • First Published August 29, 2011
Method

Discriminative prediction of mammalian enhancers from DNA sequence

  • First Published August 29, 2011
Research

Epigenetic regulation of normal human mammary cell type–specific miRNAs

  • First Published August 26, 2011
Method

A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data

  • First Published August 26, 2011
Research

Delineation of key regulatory elements identifies points of vulnerability in the mitogen-activated signaling network

  • First Published August 24, 2011
Research

Relating CNVs to transcriptome data at fine resolution: Assessment of the effect of variant size, type, and overlap with functional regions

  • First Published August 23, 2011
Show per page