Corrigendum
Corrigendum: Profiling the long noncoding RNA interaction network in the regulatory elements of target genes by chromatin in situ reverse transcription sequencing
- First Published October 1, 2026
Corrigendum
Corrigendum: Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources
- First Published July 7, 2026
Research
Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources
- First Published May 14, 2026
Resource
Charting the regulatory landscape of TP53 on transposable elements in cancer
- First Published May 13, 2025
Resource
Exploring the epigenome profiles of repetitive elements with the WashU Repeat Browser
- First Published February 21, 2025
Resource
Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution
- First Published January 14, 2025
Method
Using long-read CAGE sequencing to profile cryptic-promoter-derived transcripts and their contribution to the immunopeptidome
- First Published December 8, 2023
Research
Gaps and complex structurally variant loci in phased genome assemblies
- First Published May 10, 2023
Resource
Comparing genomic and epigenomic features across species using the WashU Comparative Epigenome Browser
- First Published May 8, 2023
Research
Functional characterization of enhancer activity during a long terminal repeat's evolution
- First Published October 3, 2022
Research
Genome-wide mapping reveals R-loops associated with centromeric repeats in maize
- First Published July 9, 2021
Method
Analysis of alternative polyadenylation from single-cell RNA-seq using scDaPars reveals cell subpopulations invisible to gene expression
- First Published May 25, 2021
Method
Transcript assembly improves expression quantification of transposable elements in single-cell RNA-seq data
- First Published December 21, 2020
Method
Epigenomic differences in the human and chimpanzee genomes are associated with structural variation
- First Published December 10, 2020
Corrigendum
Corrigendum: 3′ UTR lengthening as a novel mechanism in regulating cellular senescence
- First Published September 14, 2020
Method
A novel synthetic-genetic-array–based yeast one-hybrid system for high discovery rate and short processing time
- First Published June 11, 2019
Method
Guide Positioning Sequencing identifies aberrant DNA methylation patterns that alter cell identity and tumor-immune surveillance networks
- First Published January 22, 2019
Research
3′ UTR lengthening as a novel mechanism in regulating cellular senescence
- First Published February 12, 2018
Research
Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis
- First Published December 22, 2017
Research
Recurrent epimutations activate gene body promoters in primary glioblastoma
- First Published April 7, 2014
Method
Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm
- First Published June 26, 2013
Method
Estimating absolute methylation levels at single-CpG resolution from methylation enrichment and restriction enzyme sequencing methods
- First Published June 26, 2013
Method
DANPOS: Dynamic analysis of nucleosome position and occupancy by sequencing
- First Published November 28, 2012
Research
Stabilization of the promoter nucleosomes in nucleosome-free regions by the yeast Cyc8–Tup1 corepressor
- First Published November 2, 2012
Method
Spatiotemporal clustering of the epigenome reveals rules of dynamic gene regulation
- First Published October 2, 2012
Research
Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation
- First Published March 1, 2011
Resource
The Drosophila melanogaster transcriptome by paired-end RNA sequencing
- First Published December 22, 2010
Research
Function annotation of the rice transcriptome at single-nucleotide resolution by RNA-seq
- First Published July 13, 2010
Methods
DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression
- First Published October 29, 2008
LETTER
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
- First Published February 7, 2008
