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Highly accurate assembly polishing with DeepPolisher

  • First Published May 19, 2025

Lake Malawi cichlid pangenome graph reveals extensive structural variation driven by transposable elements

  • First Published April 10, 2025

MCHelper automatically curates transposable element libraries across eukaryotic species

  • First Published December 9, 2024

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

  • First Published July 1, 2024

Ultrafast genome-wide inference of pairwise coalescence times

  • First Published August 10, 2023

Diversity, duplication, and genomic organization of homeobox genes in Lepidoptera

  • First Published December 8, 2022

Domain-adaptive neural networks improve cross-species prediction of transcription factor binding

  • First Published January 18, 2022

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

  • First Published March 4, 2020

HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient

  • First Published August 30, 2017

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

  • First Published April 10, 2017
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