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Research

The rate of de novo structural variation is increased in in vitro–produced offspring and preferentially affects the paternal genome

  • Young-Lim Lee
  • Aniek C. Bouwman
  • Chad Harland
  • Mirte Bosse
  • Gabriel Costa Monteiro Moreira
  • Roel F. Veerkamp Erik Mullaart Nadine Cambisano Martien A.M. Groenen
  • ... [+4 authors] ...,
  • Latifa Karim
  • Wouter Coppieters
  • Michel Georges
  • Carole Charlier
  • First Published October 4, 2023
Resource

An organism-wide ATAC-seq peak catalog for the bovine and its use to identify regulatory variants

  • Can Yuan
  • Lijing Tang
  • Thomas Lopdell
  • Vyacheslav A. Petrov
  • Claire Oget-Ebrad
  • Gabriel Costa Monteiro Moreira José Luis Gualdrón Duarte Arnaud Sartelet Zhangrui Cheng Mazdak Salavati D. Claire Wathes Mark A. Crowe Wouter Coppieters Mathew Littlejohn Carole Charlier Tom Druet Michel Georges Haruko Takeda Mark Crowe Niamh McLoughlin Alan Fahey Elizabeth Matthews Andreia Santoro Colin Byrne Pauline Rudd Roisin O'Flaherty Sinead Hallinan Claire Wathes Zhangrui Cheng Ali Fouladi Geoff Pollott Dirk Werling Beatriz Sanz Bernardo Mazdak Salavati Laura Buggiotti Alistair Wylie Matt Bell Conrad Ferris Mieke Vaneetvelde Kristof Hermans Geert Opsomer Sander Moerman Jenne De Koster Hannes Bogaert Jan Vandepitte Leila Vandevelde Bonny Vanranst Johanna Hoglund Susanne Dahl Klaus Ingvartsen Martin Sørensen Leslie Foldager Soren Ostergaard Janne Rothmann Mogens Krogh Else Meyer Charlotte Gaillard Jehan Ettema Tine Rousing Federica Signorelli Francesco Napolitano Bianca Moioli Alessandra Crisa Luca Buttazzoni Jennifer McClure Daragh Matthews Francis Kearney Andrew Cromie Matt McClure Shujun Zhang Xing Chen Huanchun Chen Junlong Zhao Liguo Yang Guohua Hua Chen Tan Guiqiang Wang Michel Bonneau Andrea Pompozzi Armin Pearn Arnold Evertson Linda Kosten Anders Fogh Thomas Andersen Matthew Lucy Chris Elsik Gavin Conant Jerry Taylor Nicolas Gengler Michel Georges Frederic Colinet Marilou Ramos Pamplona Hedi Hammami Catherine Bastin Haruko Takeda Aurelie Laine
  • ... [+91 authors] ...,
  • Lijing Tang
  • Martin Schulze
  • Cinzia Marchitelli
  • Sergio Palma-Vera
  • First Published September 26, 2023
Method

SNP-based quantitative deconvolution of biological mixtures: application to the detection of cows with subclinical mastitis by whole-genome sequencing of tank milk

  • Wouter Coppieters
  • Latifa Karim
  • Michel Georges
  • First Published June 26, 2020
Research

NGS-based reverse genetic screen for common embryonic lethal mutations compromising fertility in livestock

  • Carole Charlier
  • Wanbo Li
  • Chad Harland
  • Mathew Littlejohn
  • Wouter Coppieters
  • Frances Creagh Steve Davis Tom Druet Pierre Faux François Guillaume Latifa Karim Mike Keehan
  • ... [+7 authors] ...,
  • Naveen Kumar Kadri
  • Nico Tamma
  • Richard Spelman
  • Michel Georges
  • First Published September 19, 2016
Research

HFM1, MLH3, MSH4, MSH5, RNF212, and RNF212B affect recombination rate in cattle" > Coding and noncoding variants in HFM1, MLH3, MSH4, MSH5, RNF212, and RNF212B affect recombination rate in cattle

  • Naveen Kumar Kadri
  • Chad Harland
  • Pierre Faux
  • Nadine Cambisano
  • Latifa Karim
  • Wouter Coppieters Sébastien Fritz Erik Mullaart Denis Baurain Didier Boichard
  • ... [+5 authors] ...,
  • Richard Spelman
  • Carole Charlier
  • Michel Georges
  • Tom Druet
  • First Published August 11, 2016
Research

Small noncoding differentially methylated copy-number variants, including lncRNA genes, cause a lethal lung developmental disorder

  • Przemyslaw Szafranski
  • Avinash V. Dharmadhikari
  • Erwin Brosens
  • Priyatansh Gurha
  • Katarzyna E. Kołodziejska
  • Ou Zhishuo Piotr Dittwald Tadeusz Majewski K. Naga Mohan Bo Chen Richard E. Person Dick Tibboel Annelies de Klein Jason Pinner Maya Chopra Girvan Malcolm Gregory Peters Susan Arbuckle Sixto F. Guiang Virginia A. Hustead Jose Jessurun Russel Hirsch David P. Witte Isabelle Maystadt Neil Sebire
  • ... [+20 authors] ...,
  • Richard Fisher
  • Claire Langston
  • Partha Sen
  • Paweł Stankiewicz
  • First Published October 3, 2012
Research

Observation and prediction of recurrent human translocations mediated by NAHR between nonhomologous chromosomes

  • Zhishuo Ou
  • Paweł Stankiewicz
  • Zhilian Xia
  • Amy M. Breman
  • Brian Dawson
  • Joanna Wiszniewska Przemyslaw Szafranski M. Lance Cooper Mitchell Rao Lina Shao Sarah T. South Karlene Coleman Paul M. Fernhoff Marcel J. Deray Sally Rosengren Elizabeth R. Roeder Victoria B. Enciso A. Craig Chinault Ankita Patel
  • ... [+14 authors] ...,
  • Sung-Hae L. Kang
  • Chad A. Shaw
  • James R. Lupski
  • Sau W. Cheung
  • First Published January 4, 2011
LETTER

Characterization of the bovine pseudoautosomal boundary: Documenting the evolutionary history of mammalian sex chromosomes

  • Anne-Sophie Van Laere
  • Wouter Coppieters
  • Michel Georges
  • First Published November 3, 2008
ARTICLE

Serial segmental duplications during primate evolution result in complex human genome architecture

  • Paweł Stankiewicz
  • Christine J. Shaw
  • Marjorie Withers
  • Ken Inoue
  • James R. Lupski
  • First Published November 1, 2004
ARTICLE

Genes in a Refined Smith-Magenis Syndrome Critical Deletion Interval on Chromosome 17p11.2 and the Syntenic Region of the Mouse

  • Weimin Bi
  • Jiong Yan
  • Paweł Stankiewicz
  • Sung-Sup Park
  • Katherina Walz
  • Cornelius F. Boerkoel Lorraine Potocki Lisa G. Shaffer
  • ... [+3 authors] ...,
  • Koen Devriendt
  • Małgorzata J.M. Nowaczyk
  • Ken Inoue
  • James R. Lupski
  • First Published May 1, 2002
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