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Integrated single-cell multiome analysis reveals muscle fiber-type gene regulatory circuitry modulated by endurance exercise

  • Aliza B. Rubenstein
  • Gregory R. Smith
  • Zidong Zhang
  • Xi Chen
  • Toby L. Chambers
  • Frederique Ruf-Zamojski Natalia Mendelev Wan Sze Cheng Michel Zamojski Mary Anne S. Amper Venugopalan D. Nair Andrew R. Marderstein Stephen B. Montgomery Olga G. Troyanskaya
  • ... [+9 authors] ...,
  • Elena Zaslavsky
  • Todd Trappe
  • Scott Trappe
  • Stuart C. Sealfon
  • First Published May 20, 2025

Modeling transcriptional regulation of model species with deep learning

  • Evan M. Cofer
  • João Raimundo
  • Alicja Tadych
  • Yuji Yamazaki
  • Aaron K. Wong
  • Chandra L. Theesfeld
  • Michael S. Levine
  • Olga G. Troyanskaya
  • First Published April 22, 2021

Modeling molecular development of breast cancer in canine mammary tumors

  • Kiley Graim
  • Dmitriy Gorenshteyn
  • David G. Robinson
  • Nicholas J. Carriero
  • James A. Cahill
  • Rumela Chakrabarti Michael H. Goldschmidt Amy C. Durham Julien Funk John D. Storey
  • ... [+5 authors] ...,
  • Vessela N. Kristensen
  • Chandra L. Theesfeld
  • Karin U. Sorenmo
  • Olga G. Troyanskaya
  • First Published December 23, 2020

Defining cell-type specificity at the transcriptional level in human disease

  • Wenjun Ju
  • Casey S. Greene
  • Felix Eichinger
  • Viji Nair
  • Jeffrey B. Hodgin
  • Markus Bitzer Young-suk Lee Qian Zhu Masami Kehata Min Li Song Jiang
  • ... [+6 authors] ...,
  • Maria Pia Rastaldi
  • Clemens D. Cohen
  • Olga G. Troyanskaya
  • Matthias Kretzler
  • First Published August 15, 2013

Exploring the human genome with functional maps

  • Curtis Huttenhower
  • Erin M. Haley
  • Matthew A. Hibbs
  • Vanessa Dumeaux
  • Daniel R. Barrett
  • Hilary A. Coller
  • Olga G. Troyanskaya
  • First Published February 26, 2009
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