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Resource

Integrated single-cell multiome analysis reveals muscle fiber-type gene regulatory circuitry modulated by endurance exercise

Aliza B. Rubenstein
Gregory R. Smith
Zidong Zhang
Xi Chen
Toby L. Chambers
Frederique Ruf-Zamojski Natalia Mendelev Wan Sze Cheng Michel Zamojski Mary Anne S. Amper Venugopalan D. Nair Andrew R. Marderstein Stephen B. Montgomery Olga G. Troyanskaya
... [+9 authors] ...,
Elena Zaslavsky
Todd Trappe
Scott Trappe
Stuart C. Sealfon

First Published May 20, 2025

Resource

Modeling transcriptional regulation of model species with deep learning

Evan M. Cofer
João Raimundo
Alicja Tadych
Yuji Yamazaki
Aaron K. Wong
Chandra L. Theesfeld
Michael S. Levine
Olga G. Troyanskaya

First Published April 22, 2021

Resource

Modeling molecular development of breast cancer in canine mammary tumors

Kiley Graim
Dmitriy Gorenshteyn
David G. Robinson
Nicholas J. Carriero
James A. Cahill
Rumela Chakrabarti Michael H. Goldschmidt Amy C. Durham Julien Funk John D. Storey
... [+5 authors] ...,
Vessela N. Kristensen
Chandra L. Theesfeld
Karin U. Sorenmo
Olga G. Troyanskaya

First Published December 23, 2020

Method

Defining cell-type specificity at the transcriptional level in human disease

Wenjun Ju
Casey S. Greene
Felix Eichinger
Viji Nair
Jeffrey B. Hodgin
Markus Bitzer Young-suk Lee Qian Zhu Masami Kehata Min Li Song Jiang
... [+6 authors] ...,
Maria Pia Rastaldi
Clemens D. Cohen
Olga G. Troyanskaya
Matthias Kretzler

First Published August 15, 2013

Resource

Exploring the human genome with functional maps

Curtis Huttenhower
Erin M. Haley
Matthew A. Hibbs
Vanessa Dumeaux
Daniel R. Barrett
Hilary A. Coller
Olga G. Troyanskaya

First Published February 26, 2009