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Method

cis-regulation with a compendium of genome-wide histone H3K27ac profiles" > Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles

Su Wang
Chongzhi Zang
Tengfei Xiao
Jingyu Fan
Shenglin Mei
Qian Qin Qiu Wu Xujuan Li Kexin Xu
... [+4 authors] ...,
Housheng Hansen He
Myles Brown
Clifford A. Meyer
X. Shirley Liu

First Published July 27, 2016

Research

Sequence determinants of improved CRISPR sgRNA design

Han Xu
Tengfei Xiao
Chen-Hao Chen
Wei Li
Clifford A. Meyer
Qiu Wu Di Wu Le Cong
... [+3 authors] ...,
Feng Zhang
Jun S. Liu
Myles Brown
X. Shirley Liu

First Published June 10, 2015

Research

Differential DNase I hypersensitivity reveals factor-dependent chromatin dynamics

Housheng Hansen He
Clifford A. Meyer
Mei Wei Chen
V. Craig Jordan
Myles Brown
X. Shirley Liu

First Published April 16, 2012

Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

Weisheng Wu
Yong Cheng
Cheryl A. Keller
Jason Ernst
Swathi Ashok Kumar
Tejaswini Mishra Christapher Morrissey Christine M. Dorman Kuan-Bei Chen Daniela Drautz Belinda Giardine Yoichiro Shibata Lingyun Song Max Pimkin Gregory E. Crawford Terrence S. Furey Manolis Kellis Webb Miller James Taylor Stephan C. Schuster Yu Zhang
... [+16 authors] ...,
Francesca Chiaromonte
Gerd A. Blobel
Mitchell J. Weiss
Ross C. Hardison

First Published July 27, 2011

Method

Genome-wide identification of conserved regulatory function in diverged sequences

Leila Taher
David M. McGaughey
Samantha Maragh
Ivy Aneas
Seneca L. Bessling
Webb Miller
Marcelo A. Nobrega
Andrew S. McCallion
Ivan Ovcharenko

First Published May 31, 2011

Research

Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancers

Aurélien A. Sérandour
Stéphane Avner
Frédéric Percevault
Florence Demay
Maud Bizot
Céline Lucchetti-Miganeh Frédérique Barloy-Hubler Myles Brown
... [+3 authors] ...,
Mathieu Lupien
Raphaël Métivier
Gilles Salbert
Jérôme Eeckhoute

First Published January 13, 2011

Article

Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression

Yong Cheng
Weisheng Wu
Swathi Ashok Kumar
Duonan Yu
Wulan Deng
Tamara Tripic David C. King Kuan-Bei Chen Ying Zhang Daniela Drautz Belinda Giardine Stephan C. Schuster Webb Miller Francesca Chiaromonte
... [+9 authors] ...,
Yu Zhang
Gerd A. Blobel
Mitchell J. Weiss
Ross C. Hardison

First Published November 3, 2009

Letter

Elucidation of the ELK1 target gene network reveals a role in the coordinate regulation of core components of the gene regulation machinery

Joanna Boros
Ian J. Donaldson
Amanda O'Donnell
Zaneta A. Odrowaz
Leo Zeef
Mathieu Lupien
... [+1 authors] ...,
Clifford A. Meyer
X. Shirley Liu
Myles Brown
Andrew D. Sharrocks

First Published August 17, 2009

LETTER

Thylacinus cynocephalus)" > The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)

Webb Miller
Daniela I. Drautz
Jan E. Janecka
Arthur M. Lesk
Aakrosh Ratan
Lynn P. Tomsho Mike Packard Yeting Zhang Lindsay R. McClellan Ji Qi Fangqing Zhao M. Thomas P. Gilbert Love Dalén Juan Luis Arsuaga Per G.P. Ericson Daniel H. Huson
... [+11 authors] ...,
Kristofer M. Helgen
William J. Murphy
Anders Götherström
Stephan C. Schuster

First Published January 12, 2009

Letter

Cell-type selective chromatin remodeling defines the active subset of FOXA1-bound enhancers

Jérôme Eeckhoute
Mathieu Lupien
Clifford A. Meyer
Michael P. Verzi
Ramesh A. Shivdasani
X. Shirley Liu
Myles Brown

First Published January 7, 2009

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