Method
Integration of transcriptomics and long-read genomics prioritizes structural variants in rare disease
- First Published March 20, 2025
Perspective
Unraveling the hidden complexity of cancer through long-read sequencing
- First Published March 20, 2025
Review
k-mer approaches for biodiversity genomics" > k-mer approaches for biodiversity genomics
- First Published January 31, 2025
Method
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing
- First Published November 6, 2024
Resource
High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation
- First Published October 2, 2024
Research
Differences in activity and stability drive transposable element variation in tropical and temperate maize
- First Published September 9, 2024
Resource
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes
- First Published July 1, 2024
Research
The genomic basis of evolutionary differentiation among honey bees
- First Published May 4, 2021
Method
Optimized sample selection for cost-efficient long-read population sequencing
- First Published April 2, 2021
Research
Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages
- First Published November 18, 2020
Research
Comprehensive analysis of structural variants in breast cancer genomes using single-molecule sequencing
- First Published September 4, 2020
Research
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line
- First Published June 28, 2018
Corrigendum
Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data
- First Published January 2, 2018
Corrigendum
Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2
- First Published September 1, 2017
Resource
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
- First Published April 10, 2017
Research
Discovery and genotyping of structural variation from long-read haploid genome sequence data
- First Published November 28, 2016
Research
The evolution of inflorescence diversity in the nightshades and heterochrony during meristem maturation
- First Published November 7, 2016
Research
Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region
- First Published October 7, 2016
Research
Pangolin genomes and the evolution of mammalian scales and immunity
- First Published August 10, 2016
Method
INTEGRATE: gene fusion discovery using whole genome and transcriptome data
- First Published November 10, 2015
Method
Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome
- First Published October 7, 2015
Resource
Chlorocebus aethiops sabaeus)" > The genome of the vervet (Chlorocebus aethiops sabaeus)
- First Published September 16, 2015
Resource
Single haplotype assembly of the human genome from a hydatidiform mole
- First Published November 4, 2014
Resource
Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline
- First Published March 27, 2014
Method
Reconstructing complex regions of genomes using long-read sequencing technology
- First Published January 13, 2014
Research
The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2
- First Published March 14, 2012
Resource
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- First Published February 2, 2012
Resource
GAGE: A critical evaluation of genome assemblies and assembly algorithms
- First Published December 6, 2011
Resource
Assemblathon 1: A competitive assessment of de novo short read assembly methods
- First Published September 16, 2011
Research
Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee
- First Published June 17, 2011
Perspective
Assembly of large genomes using second-generation sequencing
- First Published May 27, 2010
LETTER
Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites
- First Published November 24, 2008
RESOURCE
Haplotype sorting using human fosmid clone end-sequence pairs
- First Published October 3, 2008
ARTICLE
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
- First Published June 13, 2007
RESOURCE
PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data
- First Published April 6, 2007
ARTICLE
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
- First Published July 15, 2005
LETTER
Punctuated duplication seeding events during the evolution of human chromosome 2p11
- First Published June 17, 2005
LETTER
Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana" > Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana
- First Published April 1, 2005
RESOURCE
EAnnot: A genome annotation tool using experimental evidence
- First Published December 1, 2004
LETTER
Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing
- First Published October 15, 2004
Chicken Special/Letters
The repetitive landscape of the chicken genome
- First Published July 15, 2004
METHODS
Theories and Applications for Sequencing Randomly Selected Clones
- First Published January 18, 2001
