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Method

Identification of complex genomic rearrangements in cancers using CouGaR

  • First Published November 14, 2016
Resource

Alignathon: a competitive assessment of whole-genome alignment methods

  • First Published October 1, 2014
Method

iReckon: Simultaneous isoform discovery and abundance estimation from RNA-seq data

  • First Published November 29, 2012
Resource

Detecting copy number variation with mated short reads

  • First Published August 30, 2010
Resource

Multiple whole-genome alignments without a reference organism

  • First Published January 28, 2009
RESOURCE

ProbCons: Probabilistic consistency-based multiple sequence alignment

  • First Published February 1, 2005
Methods

Automated Whole-Genome Multiple Alignment of Rat, Mouse, and Human

  • First Published April 1, 2004
LETTER

Characterization of Evolutionary Rates and Constraints in Three Mammalian Genomes

  • First Published April 1, 2004
LETTER

Quantitative Estimates of Sequence Divergence for Comparative Analyses of Mammalian Genomes

  • First Published May 1, 2003
METHODS

LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA

  • First Published March 12, 2003
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