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Research

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

  • David Thybert
  • Maša Roller
  • Fábio C.P. Navarro
  • Ian Fiddes
  • Ian Streeter
  • Christine Feig David Martin-Galvez Mikhail Kolmogorov Václav Janoušek Wasiu Akanni Bronwen Aken Sarah Aldridge Varshith Chakrapani William Chow Laura Clarke Carla Cummins Anthony Doran Matthew Dunn Leo Goodstadt Kerstin Howe Matthew Howell Ambre-Aurore Josselin Robert C. Karn Christina M. Laukaitis Lilue Jingtao Fergal Martin Matthieu Muffato Stefanie Nachtweide Michael A. Quail Cristina Sisu Mario Stanke Klara Stefflova Cock Van Oosterhout Frederic Veyrunes Ben Ward Fengtang Yang Golbahar Yazdanifar Amonida Zadissa David J. Adams Alvis Brazma Mark Gerstein Benedict Paten
  • ... [+37 authors] ...,
  • Son Pham
  • Thomas M. Keane
  • Duncan T. Odom
  • Paul Flicek
  • First Published March 21, 2018
Method

Quantitative insertion-site sequencing (QIseq) for high throughput phenotyping of transposon mutants

  • Iraad F. Bronner
  • Thomas D. Otto
  • Min Zhang
  • Kenneth Udenze
  • Chengqi Wang
  • Michael A. Quail
  • Rays H.Y. Jiang
  • John H. Adams
  • Julian C. Rayner
  • First Published May 10, 2016
Method

Revealing the genetic structure of a trait by sequencing a population under selection

  • Leopold Parts
  • Francisco A. Cubillos
  • Jonas Warringer
  • Kanika Jain
  • Francisco Salinas
  • Suzannah J. Bumpstead Mikael Molin Amin Zia Jared T. Simpson Michael A. Quail
  • ... [+5 authors] ...,
  • Alan Moses
  • Edward J. Louis
  • Richard Durbin
  • Gianni Liti
  • First Published March 21, 2011
Letter

Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans

  • Andrew P. Jackson
  • John A. Gamble
  • Tim Yeomans
  • Gary P. Moran
  • David Saunders
  • David Harris Martin Aslett Jamie F. Barrell Geraldine Butler Francesco Citiulo David C. Coleman Piet W.J. de Groot Tim J. Goodwin Michael A. Quail Jacqueline McQuillan Carol A. Munro Arnab Pain Russell T. Poulter Marie-Adèle Rajandream Hubert Renauld Martin J. Spiering Adrian Tivey
  • ... [+17 authors] ...,
  • Neil A.R. Gow
  • Barclay Barrell
  • Derek J. Sullivan
  • Matthew Berriman
  • First Published September 10, 2009
LETTER

Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

  • Nicholas R. Thomson
  • Debra J. Clayton
  • Daniel Windhorst
  • Georgios Vernikos
  • Susanne Davidson
  • Carol Churcher Michael A. Quail Mark Stevens Michael A. Jones Michael Watson Andy Barron Abigail Layton Derek Pickard Robert A. Kingsley Alex Bignell Louise Clark Barbara Harris Doug Ormond Zahra Abdellah Karen Brooks Inna Cherevach Tracey Chillingworth John Woodward Halina Norberczak Angela Lord Claire Arrowsmith Kay Jagels Sharon Moule Karen Mungall Mandy Sanders Sally Whitehead Jose A. Chabalgoity Duncan Maskell Tom Humphrey
  • ... [+29 authors] ...,
  • Mark Roberts
  • Paul A. Barrow
  • Gordon Dougan
  • Julian Parkhill
  • First Published June 26, 2008
LETTER

Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis

  • Timothy P. Stinear
  • Torsten Seemann
  • Paul F. Harrison
  • Grant A. Jenkin
  • John K. Davies
  • Paul D.R. Johnson Zahra Abdellah Claire Arrowsmith Tracey Chillingworth Carol Churcher Kay Clarke Ann Cronin Paul Davis Ian Goodhead Nancy Holroyd Kay Jagels Angela Lord Sharon Moule Karen Mungall Halina Norbertczak Michael A. Quail Ester Rabbinowitsch Danielle Walker Brian White Sally Whitehead Pamela L.C. Small Roland Brosch
  • ... [+22 authors] ...,
  • Lalita Ramakrishnan
  • Michael A. Fischbach
  • Julian Parkhill
  • Stewart T. Cole
  • First Published April 10, 2008
LETTER

Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates

  • Nicholas R. Thomson
  • Matthew T.G. Holden
  • Caroline Carder
  • Nicola Lennard
  • Sarah J. Lockey
  • Pete Marsh Paul Skipp C. David O’Connor Ian Goodhead Halina Norbertzcak Barbara Harris Doug Ormond Richard Rance
  • ... [+8 authors] ...,
  • Michael A. Quail
  • Julian Parkhill
  • Richard S. Stephens
  • Ian N. Clarke
  • First Published November 21, 2007
LETTER

Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

  • Mohammed Sebaihia
  • Michael W. Peck
  • Nigel P. Minton
  • Nicholas R. Thomson
  • Matthew T.G. Holden
  • Wilfrid J. Mitchell Andrew T. Carter Stephen D. Bentley David R. Mason Lisa Crossman Catherine J. Paul Alasdair Ivens Marjon H.J. Wells-Bennik Ian J. Davis Ana M. Cerdeño-Tárraga Carol Churcher Michael A. Quail Tracey Chillingworth Theresa Feltwell Audrey Fraser Ian Goodhead Zahra Hance Kay Jagels Natasha Larke Mark Maddison Sharon Moule Karen Mungall Halina Norbertczak Ester Rabbinowitsch Mandy Sanders
  • ... [+25 authors] ...,
  • Mark Simmonds
  • Brian White
  • Sally Whithead
  • Julian Parkhill
  • First Published May 22, 2007
LETTER

Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii

  • Asis Khan
  • Ulrike Böhme
  • Krystyna A. Kelly
  • Ellen Adlem
  • Karen Brooks
  • Mark Simmonds Karen Mungall Michael A. Quail Claire Arrowsmith Tracey Chillingworth Carol Churcher David Harris Matthew Collins Nigel Fosker Audrey Fraser Zahra Hance Kay Jagels Sharon Moule Lee Murphy Susan O'Neil Marie-Adele Rajandream David Saunders Kathy Seeger Sally Whitehead Thomas Mayr Xuenan Xuan Junichi Watanabe Yutaka Suzuki Hiroyuki Wakaguri Sumio Sugano Chihiro Sugimoto Ian Paulsen Aaron J. Mackey David S. Roos Neil Hall
  • ... [+30 authors] ...,
  • Matthew Berriman
  • Bart Barrell
  • L. David Sibley
  • James W. Ajioka
  • First Published August 10, 2006
ARTICLE

The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation

  • Nicholas R. Thomson
  • Corin Yeats
  • Kenneth Bell
  • Matthew T.G. Holden
  • Stephen D. Bentley
  • Morag Livingstone Ana M. Cerdeño-Tárraga Barbara Harris Jon Doggett Doug Ormond Karen Mungall Kay Clarke Theresa Feltwell Zahra Hance Mandy Sanders Michael A. Quail
  • ... [+11 authors] ...,
  • Claire Price
  • Bart G. Barrell
  • Julian Parkhill
  • David Longbottom
  • First Published April 18, 2005
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