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Method

A simple method for finding related sequences by adding probabilities of alternative alignments

  • Martin C. Frith
  • First Published August 16, 2024
Research

A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen

  • Sung Ho Yoon
  • Serdar Turkarslan
  • David J. Reiss
  • Min Pan
  • June A. Burn
  • Kyle C. Costa Thomas J. Lie Joseph Slagel
  • ... [+3 authors] ...,
  • Robert L. Moritz
  • Murray Hackett
  • John A. Leigh
  • Nitin S. Baliga
  • First Published October 2, 2013
Resource

A miRNA-regulatory network explains how dysregulated miRNAs perturb oncogenic processes across diverse cancers

  • Christopher L. Plaisier
  • Min Pan
  • Nitin S. Baliga
  • First Published June 28, 2012
Research

Parallel evolution of transcriptome architecture during genome reorganization

  • Sung Ho Yoon
  • David J. Reiss
  • J. Christopher Bare
  • Dan Tenenbaum
  • Min Pan
  • Joseph Slagel Robert L. Moritz Sujung Lim Murray Hackett Angeli Lal Menon Michael W.W. Adams
  • ... [+6 authors] ...,
  • Adam Barnebey
  • Steven M. Yannone
  • John A. Leigh
  • Nitin S. Baliga
  • First Published July 12, 2011
Resource

Adaptive seeds tame genomic sequence comparison

  • Szymon M. Kiełbasa
  • Raymond Wan
  • Kengo Sato
  • Paul Horton
  • Martin C. Frith
  • First Published January 5, 2011
ARTICLE

A code for transcription initiation in mammalian genomes

  • Martin C. Frith
  • Eivind Valen
  • Anders Krogh
  • Yoshihide Hayashizaki
  • Piero Carninci
  • Albin Sandelin
  • First Published November 21, 2007
ARTICLE

The anatomy of microbial cell state transitions in response to oxygen

  • Amy K. Schmid
  • David J. Reiss
  • Amardeep Kaur
  • Min Pan
  • Nichole King
  • Phu T. Van
  • Laura Hohmann
  • Daniel B. Martin
  • Nitin S. Baliga
  • First Published September 4, 2007
ARTICLE

A systems view of haloarchaeal strategies to withstand stress from transition metals

  • Amardeep Kaur
  • Min Pan
  • Megan Meislin
  • Marc T. Facciotti
  • Raafat El-Gewely
  • Nitin S. Baliga
  • First Published June 2, 2006
LETTER

Evolutionary turnover of mammalian transcription start sites

  • Martin C. Frith
  • Jasmina Ponjavic
  • David Fredman
  • Chikatoshi Kai
  • Jun Kawai
  • Piero Carninci
  • Yoshihide Hayshizaki
  • Albin Sandelin
  • First Published May 10, 2006
ARTICLE

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

  • Timothy Ravasi
  • Harukazu Suzuki
  • Ken C. Pang
  • Shintaro Katayama
  • Masaaki Furuno
  • Rie Okunishi Shiro Fukuda Kelin Ru Martin C. Frith M. Milena Gongora
  • ... [+5 authors] ...,
  • Sean M. Grimmond
  • David A. Hume
  • Yoshihide Hayashizaki
  • John S. Mattick
  • First Published December 12, 2005
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