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Method

Recovering gene regulatory networks in single-cell multi-omics data with PRISM-GRN

  • Wenhao Zhang
  • Lan Cao
  • Xiaoxuan Gu
  • Yongyu Long
  • Ying Wang
  • First Published October 9, 2025
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Research

Comparative RNA sequencing reveals substantial genetic variation in endangered primates

  • George H. Perry
  • Páll Melsted
  • John C. Marioni
  • Ying Wang
  • Russell Bainer
  • Joseph K. Pickrell Katelyn Michelini Sarah Zehr
  • ... [+3 authors] ...,
  • Anne D. Yoder
  • Matthew Stephens
  • Jonathan K. Pritchard
  • Yoav Gilad
  • First Published December 29, 2011
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Resource

Caenorhabditis elegans" > Genome-wide analysis of alternative splicing in Caenorhabditis elegans

  • Arun K. Ramani
  • John A. Calarco
  • Qun Pan
  • Sepand Mavandadi
  • Ying Wang
  • Andrew C. Nelson Leo J. Lee
  • ... [+2 authors] ...,
  • Quaid Morris
  • Benjamin J. Blencowe
  • Mei Zhen
  • Andrew G. Fraser
  • First Published December 22, 2010
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
LETTER

Monodelphis domestica" > Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

  • Andrew J. Gentles
  • Matthew J. Wakefield
  • Oleksiy Kohany
  • Wanjun Gu
  • Mark A. Batzer
  • David D. Pollock
  • Jerzy Jurka
  • First Published May 10, 2007
ARTICLE

Frankia sp. strains reflect host range and host plant biogeography" > Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography

  • Philippe Normand
  • Pascal Lapierre
  • Louis S. Tisa
  • Johann Peter Gogarten
  • Nicole Alloisio
  • Emilie Bagnarol Carla A. Bassi Alison M. Berry Derek M. Bickhart Nathalie Choisne Arnaud Couloux Benoit Cournoyer Stephane Cruveiller Vincent Daubin Nadia Demange Maria Pilar Francino Eugene Goltsman Ying Huang Olga R. Kopp Laurent Labarre Alla Lapidus Celine Lavire Joelle Marechal Michele Martinez Juliana E. Mastronunzio Beth C. Mullin James Niemann Pierre Pujic Tania Rawnsley Zoe Rouy Chantal Schenowitz Anita Sellstedt Fernando Tavares Jeffrey P. Tomkins David Vallenet Claudio Valverde
  • ... [+31 authors] ...,
  • Luis G. Wall
  • Ying Wang
  • Claudine Medigue
  • David R. Benson
  • First Published December 6, 2006
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