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Research

Human papillomavirus and the landscape of secondary genetic alterations in oral cancers

  • Maura L. Gillison
  • Keiko Akagi
  • Weihong Xiao
  • Bo Jiang
  • Robert K.L. Pickard
  • Jingfeng Li Benjamin J. Swanson Amit D. Agrawal Mark Zucker Birgit Stache-Crain Anne-Katrin Emde
  • ... [+6 authors] ...,
  • Heather M. Geiger
  • Nicolas Robine
  • Kevin R. Coombes
  • David E. Symer
  • First Published December 18, 2018
Method

taxMaps: comprehensive and highly accurate taxonomic classification of short-read data in reasonable time

  • André Corvelo
  • Wayne E. Clarke
  • Nicolas Robine
  • Michael C. Zody
  • First Published March 27, 2018
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Resource

Drosophila cell lines" > Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines

  • Jiayu Wen
  • Jaaved Mohammed
  • Diane Bortolamiol-Becet
  • Harrison Tsai
  • Nicolas Robine
  • Jakub O. Westholm Erik Ladewig Qi Dai Katsutomo Okamura Alex S. Flynt Dayu Zhang Justen Andrews Lucy Cherbas
  • ... [+8 authors] ...,
  • Thomas C. Kaufman
  • Peter Cherbas
  • Adam Siepel
  • Eric C. Lai
  • First Published July 1, 2014
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Method

Drosophila melanogaster and Caenorhabditis elegans" > Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans

  • Wei-Jen Chung
  • Phaedra Agius
  • Jakub O. Westholm
  • Michael Chen
  • Katsutomo Okamura
  • Nicolas Robine
  • Christina S. Leslie
  • Eric C. Lai
  • First Published December 22, 2010
Research

Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence" > Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence

  • Eugene Berezikov
  • Nicolas Robine
  • Anastasia Samsonova
  • Jakub O. Westholm
  • Ammar Naqvi
  • Jui-Hung Hung Katsutomo Okamura Qi Dai Diane Bortolamiol-Becet Raquel Martin Yongjun Zhao Phillip D. Zamore Gregory J. Hannon
  • ... [+8 authors] ...,
  • Marco A. Marra
  • Zhiping Weng
  • Norbert Perrimon
  • Eric C. Lai
  • First Published December 22, 2010
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Drosophila ovary cell line" > Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line

  • Nelson C. Lau
  • Nicolas Robine
  • Raquel Martin
  • Wei-Jen Chung
  • Yuzo Niki
  • Eugene Berezikov
  • Eric C. Lai
  • First Published June 18, 2009
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