Letter

Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line

    • 1 Department of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts 02114, USA;
    • 2 Department of Genetics, Harvard Medical School. Boston, Massachusetts 02115, USA;
    • 3 Department of Developmental Biology, Sloan-Kettering Institute, New York, New York 10065, USA;
    • 4 Department of Sciences, Ibaraki University, Mito 310-8512, Japan;
    • 5 Hubrecht Institute and University Medical Center Utrecht, Uppsalalaan 8, 3584CT Utrecht, The Netherlands
    • 6 These authors contributed equally to this work.
    • 7 Present address: Department of Biology, Brandeis University, 415 South Street, Waltham, MA 02454, USA.
    • 8 Corresponding authors. E-mail [email protected]; fax (212) 717-3623. E-mail [email protected]; fax (781) 736-2405.
Published June 18, 2009. Vol 19 Issue 10, pp. 1776-1785. https://doi.org/10.1101/gr.094896.109
Download PDF Please log-in to or register for your personal account in order to access PDF Cite Article Permissions Share
cover of Genome Research Vol 36 Issue 4
Current Issue:
April 2026, Vol. 36, No. 4
Focus view

Abstract

Piwi proteins, a subclass of Argonaute-family proteins, carry ∼24–30-nt Piwi-interacting RNAs (piRNAs) that mediate gonadal defense against transposable elements (TEs). We analyzed the Drosophila ovary somatic sheet (OSS) cell line and found that it expresses miRNAs, endogenous small interfering RNAs (endo-siRNAs), and piRNAs in abundance. In contrast to intact gonads, which contain mixtures of germline and somatic cell types that express different Piwi-class proteins, OSS cells are a homogenous somatic cell population that expresses only PIWI and primary piRNAs. Detailed examination of its TE-derived piRNAs and endo-siRNAs revealed aspects of TE defense that do not rely upon ping-pong amplification. In particular, we provide evidence that a subset of piRNA master clusters, including flamenco, are specifically expressed in OSS and ovarian follicle cells. These data indicate that the restriction of certain TEs in somatic gonadal cells is largely mediated by a primary piRNA pathway.

Back to top
Article contents

Announcement(s)