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Research

Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion" > Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion

  • James Hadfield
  • Simon R. Harris
  • Helena M.B. Seth-Smith
  • Surendra Parmar
  • Patiyan Andersson
  • Philip M. Giffard Julius Schachter Jeanne Moncada Louise Ellison María Lucía Gallo Vaulet Marcelo Rodríguez Fermepin Frans Radebe Suyapa Mendoza Sander Ouburg Servaas A. Morré Konrad Sachse Mirja Puolakkainen Suvi J. Korhonen Chris Sonnex Rebecca Wiggins Hamid Jalal Tamara Brunelli Patrizia Casprini Rachel Pitt Cathy Ison Alevtina Savicheva Elena Shipitsyna Ronza Hadad Laszlo Kari Matthew J. Burton David Mabey Anthony W. Solomon David Lewis Peter Marsh
  • ... [+29 authors] ...,
  • Magnus Unemo
  • Ian N. Clarke
  • Julian Parkhill
  • Nicholas R. Thomson
  • First Published June 6, 2017
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Method

Chlamydia trachomatis directly from clinical samples without culture" > Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture

  • Helena M.B. Seth-Smith
  • Simon R. Harris
  • Rachel J. Skilton
  • Frans M. Radebe
  • Daniel Golparian
  • Elena Shipitsyna Pham Thanh Duy Paul Scott Lesley T. Cutcliffe Colette O’Neill Surendra Parmar Rachel Pitt Stephen Baker Catherine A. Ison Peter Marsh Hamid Jalal David A. Lewis
  • ... [+12 authors] ...,
  • Magnus Unemo
  • Ian N. Clarke
  • Julian Parkhill
  • Nicholas R. Thomson
  • First Published March 22, 2013
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype" > Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype

  • Robert A. Kingsley
  • Chisomo L. Msefula
  • Nicholas R. Thomson
  • Samuel Kariuki
  • Kathryn E. Holt
  • Melita A. Gordon David Harris Louise Clarke Sally Whitehead Vartul Sangal Kevin Marsh Mark Achtman Malcolm E. Molyneux Martin Cormican
  • ... [+9 authors] ...,
  • Julian Parkhill
  • Calman A. MacLennan
  • Robert S. Heyderman
  • Gordon Dougan
  • First Published November 9, 2009
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
LETTER

Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways" > Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

  • Nicholas R. Thomson
  • Debra J. Clayton
  • Daniel Windhorst
  • Georgios Vernikos
  • Susanne Davidson
  • Carol Churcher Michael A. Quail Mark Stevens Michael A. Jones Michael Watson Andy Barron Abigail Layton Derek Pickard Robert A. Kingsley Alex Bignell Louise Clark Barbara Harris Doug Ormond Zahra Abdellah Karen Brooks Inna Cherevach Tracey Chillingworth John Woodward Halina Norberczak Angela Lord Claire Arrowsmith Kay Jagels Sharon Moule Karen Mungall Mandy Sanders Sally Whitehead Jose A. Chabalgoity Duncan Maskell Tom Humphrey
  • ... [+29 authors] ...,
  • Mark Roberts
  • Paul A. Barrow
  • Gordon Dougan
  • Julian Parkhill
  • First Published June 26, 2008
LETTER

Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates" > Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates

  • Nicholas R. Thomson
  • Matthew T.G. Holden
  • Caroline Carder
  • Nicola Lennard
  • Sarah J. Lockey
  • Pete Marsh Paul Skipp C. David O’Connor Ian Goodhead Halina Norbertzcak Barbara Harris Doug Ormond Richard Rance
  • ... [+8 authors] ...,
  • Michael A. Quail
  • Julian Parkhill
  • Richard S. Stephens
  • Ian N. Clarke
  • First Published November 21, 2007
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