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Research

Nuclear mitochondrial sequences in great ape telomere-to-telomere genomes

  • First Published August 18, 2026
Research

Single-cell template strand sequencing reveals culture-induced chromosomal instability in a gibbon cell line

  • First Published May 4, 2026
Resource

A high-resolution map of small-scale inversions in the gibbon genome

  • First Published September 30, 2022
Research

Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages

  • First Published November 18, 2020
Resource

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

  • First Published October 22, 2020
Resource

Inversion variants in human and primate genomes

  • First Published May 18, 2018
Corrigendum

Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data

  • First Published January 2, 2018
Corrigendum

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

  • First Published September 1, 2017
Resource

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

  • First Published April 10, 2017
Research

Discovery and genotyping of structural variation from long-read haploid genome sequence data

  • First Published November 28, 2016
Research

Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region

  • First Published October 7, 2016
Research

Pangolin genomes and the evolution of mammalian scales and immunity

  • First Published August 10, 2016
Method

INTEGRATE: gene fusion discovery using whole genome and transcriptome data

  • First Published November 10, 2015
Resource

Single haplotype assembly of the human genome from a hydatidiform mole

  • First Published November 4, 2014
Resource

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline

  • First Published March 27, 2014
Method

Reconstructing complex regions of genomes using long-read sequencing technology

  • First Published January 13, 2014
Research

Hominoid fission of chromosome 14/15 and the role of segmental duplications

  • First Published September 27, 2013
Research

Evolution and diversity of copy number variation in the great ape lineage

  • First Published July 3, 2013
Research

Evolutionary dynamism of the primate LRRC37 gene family

  • First Published October 11, 2012
Resource

MuSiC: Identifying mutational significance in cancer genomes

  • First Published July 3, 2012
Research

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

  • First Published March 14, 2012
Resource

Copy number variation of individual cattle genomes using next-generation sequencing

  • First Published February 2, 2012
Research

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

  • First Published June 17, 2011
Research

Alu repeat discovery and characterization within human genomes

  • First Published December 3, 2010
Method

Genome-wide characterization of centromeric satellites from multiple mammalian genomes

  • First Published November 16, 2010
Resource

Analysis of copy number variations among diverse cattle breeds

  • First Published March 8, 2010
Resource

The genomic architecture of segmental duplications and associated copy number variants in dogs

  • First Published January 7, 2009
LETTER

Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

  • First Published November 24, 2008
RESOURCE

Haplotype sorting using human fosmid clone end-sequence pairs

  • First Published October 3, 2008
ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • First Published June 13, 2007
RESOURCE

PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data

  • First Published April 6, 2007
RESOURCE

Molecular refinement of gibbon genome rearrangements

  • First Published December 21, 2006
Methods

Physical map-assisted whole-genome shotgun sequence assemblies

  • First Published June 1, 2006
LETTER

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

  • First Published April 10, 2006
LETTER

A genome-wide survey of structural variation between human and chimpanzee

  • First Published September 16, 2005
ARTICLE

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

  • First Published July 15, 2005
LETTER

Punctuated duplication seeding events during the evolution of human chromosome 2p11

  • First Published June 17, 2005
LETTER

Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana

  • First Published April 1, 2005
RESOURCE

EAnnot: A genome annotation tool using experimental evidence

  • First Published December 1, 2004
LETTER

Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing

  • First Published October 15, 2004
LETTER

Recurrent Sites for New Centromere Seeding

  • First Published September 1, 2004
Chicken Special/Letters

The repetitive landscape of the chicken genome

  • First Published July 15, 2004
ARTICLE

Analysis of Segmental Duplications and Genome Assembly in the Mouse

  • First Published May 3, 2004
LETTER

Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)

  • First Published January 14, 2003
LETTER

Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25

  • First Published January 1, 2003
INSIGHT/OUTLOOK

What is Finished, and Why Does it Matter

  • First Published May 1, 2002
LETTER

Human Paralogs of KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms

  • First Published January 1, 2002
LETTER

Centromere Emergence in Evolution

  • First Published April 1, 2001
METHODS

Theories and Applications for Sequencing Randomly Selected Clones

  • First Published January 18, 2001
LETTER

A Pneumatic Device for Rapid Loading of DNA Sequencing Gels

  • First Published May 1, 1998
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