Method
Simultaneous modeling of chromatin conformation changes from multiple single-cell interaction maps with ChromMovie
- First Published April 8, 2026
Research
An AR-ERG transcriptional signature defined by long-range chromatin interactomes in prostate cancer cells
- First Published January 3, 2019
Method
An integrated 3-Dimensional Genome Modeling Engine for data-driven simulation of spatial genome organization
- First Published October 27, 2016
Research
Great ape Y Chromosome and mitochondrial DNA phylogenies reflect subspecies structure and patterns of mating and dispersal
- First Published February 16, 2016
Resource
Chlorocebus aethiops sabaeus)" > The genome of the vervet (Chlorocebus aethiops sabaeus)
- First Published September 16, 2015
Research
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
- First Published September 5, 2012
Resource
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- First Published September 5, 2012
Resource
A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons
- First Published August 14, 2012
Research
Copy number variation analysis in the great apes reveals species-specific patterns of structural variation
- First Published August 8, 2011
Research
Transcriptional consequences of genomic structural aberrations in breast cancer
- First Published April 5, 2011
Research
Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomes
- First Published April 5, 2011
Research
Gene amplification as double minutes or homogeneously staining regions in solid tumors: Origin and structure
- First Published July 14, 2010
Letter
Evolutionary descent of a human chromosome 6 neocentromere: A jump back to 17 million years ago
- First Published May 1, 2009
Next-Generation DNA Sequencing/Review
Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses
- First Published April 1, 2009
LETTER
Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites
- First Published November 24, 2008
LETTER
Evolution of the mammalian transcription factor binding repertoire via transposable elements
- First Published August 5, 2008
LETTER
Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)
- First Published June 13, 2007
LETTER
Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution
- First Published June 13, 2007
Methods
Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies
- First Published June 13, 2007
PERSPECTIVE
Ancestral genomes reconstruction: An integrated, multi-disciplinary approach is needed
- First Published October 19, 2006
LETTER
A genome-wide survey of structural variation between human and chimpanzee
- First Published September 16, 2005
LETTER
Punctuated duplication seeding events during the evolution of human chromosome 2p11
- First Published June 17, 2005
LETTER
Insertion of Telomeric Repeats at Intrachromosomal Break Sites During Primate Evolution
- First Published August 12, 2004
ARTICLE
Analysis of Segmental Duplications and Genome Assembly in the Mouse
- First Published May 3, 2004
LETTER
Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)
- First Published January 14, 2003
LETTER
Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25
- First Published January 1, 2003
ARTICLE
CAGGG Repeats and the Pericentromeric Duplication of the Hominoid Genome
- First Published November 1, 1999
ARTICLE
Extreme Reduction of Chromosome-Specific α-Satellite Array Is Unusually Common in Human Chromosome 21
- First Published October 1, 1999