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Method

Deciphering context-specific gene programs from single-cell and spatial transcriptomics data with DeCEP

  • Lin Li
  • Xianbin Su
  • Ze-Guang Han
  • First Published August 21, 2025
Research

A high-resolution gene expression atlas links dedicated meristem genes to key architectural traits

  • Steffen Knauer
  • Marie Javelle
  • Lin Li
  • Xianran Li
  • Xiaoli Ma
  • Kokulapalan Wimalanathan Sunita Kumari Robyn Johnston Samuel Leiboff Robert Meeley Patrick S. Schnable Doreen Ware Carolyn Lawrence-Dill
  • ... [+8 authors] ...,
  • Jianming Yu
  • Gary J. Muehlbauer
  • Michael J. Scanlon
  • Marja C.P. Timmermans
  • First Published November 19, 2019
Research

Yeast genetic interaction screen of human genes associated with amyotrophic lateral sclerosis: identification of MAP2K5 kinase as a potential drug target

  • Myungjin Jo
  • Ah Young Chung
  • Nozomu Yachie
  • Minchul Seo
  • Hyejin Jeon
  • Youngpyo Nam Yeojin Seo Eunmi Kim Quan Zhong
  • ... [+4 authors] ...,
  • Marc Vidal
  • Hae Chul Park
  • Frederick P. Roth
  • Kyoungho Suk
  • First Published June 8, 2017
Method

An extended set of yeast-based functional assays accurately identifies human disease mutations

  • Song Sun
  • Fan Yang
  • Guihong Tan
  • Michael Costanzo
  • Rose Oughtred
  • Jodi Hirschman Chandra L. Theesfeld Pritpal Bansal Nidhi Sahni Song Yi Analyn Yu Tanya Tyagi Cathy Tie David E. Hill Marc Vidal
  • ... [+10 authors] ...,
  • Brenda J. Andrews
  • Charles Boone
  • Kara Dolinski
  • Frederick P. Roth
  • First Published March 14, 2016
Research

Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma

  • Zhengyan Kan
  • Hancheng Zheng
  • Xiao Liu
  • Shuyu Li
  • Thomas D. Barber
  • Zhuolin Gong Huan Gao Ke Hao Melinda D. Willard Jiangchun Xu Robert Hauptschein Paul A. Rejto Julio Fernandez Guan Wang Qinghui Zhang Bo Wang Ronghua Chen Jian Wang Nikki P. Lee Wei Zhou Zhao Lin Zhiyu Peng Kang Yi Shengpei Chen Lin Li Xiaomei Fan Jie Yang Rui Ye Jia Ju Kai Wang Heather Estrella Shibing Deng Ping Wei Ming Qiu Isabella H. Wulur Jiangang Liu Mariam E. Ehsani Chunsheng Zhang Andrey Loboda Wing Kin Sung Amit Aggarwal Ronnie T. Poon Sheung Tat Fan Jun Wang James Hardwick Christoph Reinhard
  • ... [+41 authors] ...,
  • Hongyue Dai
  • Yingrui Li
  • John M. Luk
  • Mao Mao
  • First Published June 20, 2013
Resource

C. elegans ORFeome" > Large-scale RACE approach for proactive experimental definition of C. elegans ORFeome

  • Kourosh Salehi-Ashtiani
  • Chenwei Lin
  • Tong Hao
  • Yun Shen
  • David Szeto
  • Xinping Yang Lila Ghamsari HanJoo Lee Changyu Fan Ryan R. Murray Stuart Milstein Nenad Svrzikapa
  • ... [+7 authors] ...,
  • Michael E. Cusick
  • Frederick P. Roth
  • David E. Hill
  • Marc Vidal
  • First Published October 2, 2009
Resource

Analysis of the human E2 ubiquitin conjugating enzyme protein interaction network

  • Gabriel Markson
  • Christina Kiel
  • Russell Hyde
  • Stephanie Brown
  • Panagoula Charalabous
  • Anja Bremm Jennifer Semple Jonathan Woodsmith Simon Duley Kourosh Salehi-Ashtiani Marc Vidal
  • ... [+6 authors] ...,
  • David Komander
  • Luis Serrano
  • Paul Lehner
  • Christopher M. Sanderson
  • First Published June 23, 2009
Methods

Shifted Transversal Design smart-pooling for high coverage interactome mapping

  • Xiaofeng Xin
  • Jean-François Rual
  • Tomoko Hirozane-Kishikawa
  • David E. Hill
  • Marc Vidal
  • Charles Boone
  • Nicolas Thierry-Mieg
  • First Published May 15, 2009
LETTER

Saccharomyces cerevisiae predicted ORFeome" > Revisiting the Saccharomyces cerevisiae predicted ORFeome

  • Qian-Ru Li
  • Anne-Ruxandra Carvunis
  • Haiyuan Yu
  • Jing-Dong J. Han
  • Quan Zhong
  • Nicolas Simonis Stanley Tam Tong Hao Niels J. Klitgord Denis Dupuy Danny Mou Ilan Wapinski
  • ... [+7 authors] ...,
  • Aviv Regev
  • David E. Hill
  • Michael E. Cusick
  • Marc Vidal
  • First Published May 23, 2008
LETTER

Arabidopsis" > A microarray analysis of the rice transcriptome and its comparison to Arabidopsis

  • Ligeng Ma
  • Chen Chen
  • Xigang Liu
  • Yuling Jiao
  • Ning Su
  • Lin Li Xiangfeng Wang Mengliang Cao Ning Sun Xiuqing Zhang Jingyue Bao Jian Li Soren Pedersen Lars Bolund Hongyu Zhao Longping Yuan
  • ... [+11 authors] ...,
  • Gane Ka-Shu Wong
  • Jun Wang
  • Xing Wang Deng
  • Jian Wang
  • First Published September 1, 2005
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