Method
Analyzing rare mutations in metagenomes assembled using long and accurate reads
- First Published November 23, 2022
Method
Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
- First Published November 15, 2022
Method
Variations in antibody repertoires correlate with vaccine responses
- First Published March 31, 2022
Research
Deep sequencing of 1320 genes reveals the landscape of protein-truncating variants and their contribution to psoriasis in 19,973 Chinese individuals
- First Published June 21, 2021
Research
V(DD)J recombination is an important and evolutionarily conserved mechanism for generating antibodies with unusually long CDR3s
- First Published September 18, 2020
Method
Plasmid detection and assembly in genomic and metagenomic data sets
- First Published May 2, 2019
Research
Arabidopsis thaliana" > Massive variation of short tandem repeats with functional consequences across strains of Arabidopsis thaliana
- First Published July 3, 2018
Method
Detection and analysis of ancient segmental duplications in mammalian genomes
- First Published May 7, 2018
Method
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
- First Published October 11, 2017
Method
A flexible method for estimating the fraction of fitness influencing mutations from large sequencing data sets
- First Published April 14, 2016
Research
Comprehensive identification and analysis of human accelerated regulatory DNA
- First Published June 23, 2015
Research
Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast
- First Published May 29, 2013
Method
Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform" > Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform
- First Published April 5, 2013
Research
Personal and population genomics of human regulatory variation
- First Published September 5, 2012
Method
A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data
- First Published August 26, 2011
Research
Signatures of positive selection apparent in a small sample of human exomes
- First Published August 6, 2010
Perspective
Constructing genomic maps of positive selection in humans: Where do we go from here?
- First Published May 1, 2009
Resource
The genomic architecture of segmental duplications and associated copy number variants in dogs
- First Published January 7, 2009
Methods
Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes
- First Published April 21, 2008
Methods
Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation
- First Published August 9, 2007
LETTER
Genomic signatures of positive selection in humans and the limits of outlier approaches
- First Published July 6, 2006
Forum
The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction
- First Published March 1, 2006
LETTER
Fitting background-selection predictions to levels of nucleotide variation and divergence along the human autosomes
- First Published September 1, 2005
Methods
Simultaneous genotyping, gene-expression measurement, and detection of allele-specific expression with oligonucleotide arrays
- First Published February 1, 2005
Chicken Special/Letters
Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages
- First Published December 8, 2004
LETTER
Alu repeat elements reveals complex evolutionary history" > Whole-genome analysis of Alu repeat elements reveals complex evolutionary history
- First Published November 1, 2004
ARTICLE
Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes
- First Published April 1, 2004
LETTER
Interrogating a High-Density SNP Map for Signatures of Natural Selection
- First Published December 1, 2002
LETTER
Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species
- First Published January 1, 2002
METHODS
Efficiency of Database Search for Identification of Mutated and Modified Proteins via Mass Spectrometry
- First Published February 1, 2001