Method
Multicondition and multimodal temporal profile inference during mouse embryonic development
- First Published August 14, 2025
Method
Analyzing rare mutations in metagenomes assembled using long and accurate reads
- First Published November 23, 2022
Method
Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
- First Published November 15, 2022
Method
Variations in antibody repertoires correlate with vaccine responses
- First Published March 31, 2022
Resource
Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes
- First Published April 22, 2021
Research
Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands
- First Published April 20, 2021
Research
V(DD)J recombination is an important and evolutionarily conserved mechanism for generating antibodies with unusually long CDR3s
- First Published September 18, 2020
Research
Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology
- First Published April 21, 2020
Method
Plasmid detection and assembly in genomic and metagenomic data sets
- First Published May 2, 2019
Method
Detection and analysis of ancient segmental duplications in mammalian genomes
- First Published May 7, 2018
Research
A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
- First Published November 9, 2016
Corrigendum
Corrigendum: MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals
- First Published August 3, 2015
Research
Exome sequencing reveals pathogenic mutations in 91 strains of mice with Mendelian disorders
- First Published April 27, 2015
Method
MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals
- First Published February 6, 2015
Research
Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains
- First Published November 4, 2014
Method
In vitro, long-range sequence information for de novo genome assembly via transposase contiguity
- First Published October 19, 2014
Resource
The million mutation project: A new approach to genetics in Caenorhabditis elegans
- First Published June 25, 2013
Method
Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform
- First Published April 5, 2013
Method
Single molecule molecular inversion probes for targeted, high-accuracy detection of low-frequency variation
- First Published February 4, 2013
Method
Ultra-low-input, tagmentation-based whole-genome bisulfite sequencing
- First Published March 30, 2012
Method
Trans genomic capture and sequencing of primate exomes reveals new targets of positive selection
- First Published July 27, 2011
Research
Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee
- First Published June 17, 2011
Research
Global survey of escape from X inactivation by RNA-sequencing in mouse
- First Published April 2, 2010
Methods
Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes
- First Published April 21, 2008
Methods
Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation
- First Published August 9, 2007
Forum
The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction
- First Published March 1, 2006
Methods
Discovering functional transcription-factor combinations in the human cell cycle
- First Published June 1, 2005
Chicken Special/Letters
Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages
- First Published December 8, 2004
LETTER
Whole-genome analysis of Alu repeat elements reveals complex evolutionary history
- First Published November 1, 2004
ARTICLE
Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes
- First Published April 1, 2004
LETTER
Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species
- First Published January 1, 2002
METHODS
Efficiency of Database Search for Identification of Mutated and Modified Proteins via Mass Spectrometry
- First Published February 1, 2001