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Deep neural networks for interpreting RNA-binding protein target preferences

  • First Published January 28, 2020

DDX54 regulates transcriptome dynamics during DNA damage response

  • First Published June 8, 2017

The mRNA-bound proteome of the early fly embryo

  • First Published April 28, 2016

Integrated detection of natural antisense transcripts using strand-specific RNA sequencing data

  • First Published July 1, 2013

Predicting cell-type–specific gene expression from regions of open chromatin

  • First Published September 5, 2012

Arabidopsis" > High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis

  • First Published September 22, 2011

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

  • First Published August 27, 2010

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention

  • First Published August 24, 2009

A transcription factor affinity-based code for mammalian transcription initiation

  • First Published January 13, 2009

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

  • First Published July 14, 2008
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