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k using minimum decycling sets" > Efficient minimizer orders for large values of k using minimum decycling sets

David Pellow
Lianrong Pu
Bariş Ekim
Lior Kotlar
Bonnie Berger
Ron Shamir
Yaron Orenstein

First Published August 9, 2023

Enhancer methylation dynamics contribute to cancer plasticity and patient mortality

Rachel E. Bell
Tamar Golan
Danna Sheinboim
Hagar Malcov
David Amar
Avi Salamon Tamar Liron
... [+2 authors] ...,
Sahar Gelfman
Yankel Gabet
Ron Shamir
Carmit Levy

First Published February 23, 2016

cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans" > A novel candidate cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans

Chaim Linhart
Yonit Halperin
Amir Darom
Shahar Kidron
Limor Broday
Ron Shamir

First Published September 19, 2011

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

Lukas Chavez
Justyna Jozefczuk
Christina Grimm
Jörn Dietrich
Bernd Timmermann
Hans Lehrach
Ralf Herwig
James Adjaye

First Published August 27, 2010

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention

Andrew L. Hufton
Susanne Mathia
Helene Braun
Udo Georgi
Hans Lehrach
Martin Vingron
Albert J. Poustka
Georgia Panopoulou

First Published August 24, 2009

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

Andrew L. Hufton
Detlef Groth
Martin Vingron
Hans Lehrach
Albert J. Poustka
Georgia Panopoulou

First Published July 14, 2008

Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets

Chaim Linhart
Yonit Halperin
Ron Shamir

First Published April 14, 2008

Refinement and expansion of signaling pathways: The osmotic response network in yeast

Irit Gat-Viks
Ron Shamir

First Published January 31, 2007

Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications" > Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications

Pierre Hilson
Joke Allemeersch
Thomas Altmann
Sébastien Aubourg
Alexandra Avon
Jim Beynon Rishikesh P. Bhalerao Frédérique Bitton Michel Caboche Bernard Cannoot Vasil Chardakov Cécile Cognet-Holliger Vincent Colot Mark Crowe Caroline Darimont Steffen Durinck Holger Eickhoff Andéol Falcon de Longevialle Edward E. Farmer Murray Grant Martin T.R. Kuiper Hans Lehrach Céline Léon Antonio Leyva Joakim Lundeberg Claire Lurin Yves Moreau Wilfried Nietfeld Javier Paz-Ares Philippe Reymond Pierre Rouzé Goran Sandberg Maria Dolores Segura Carine Serizet Alexandra Tabrett Ludivine Taconnat Vincent Thareau Paul Van Hummelen Steven Vercruysse Marnik Vuylsteke Magdalena Weingartner Peter J. Weisbeek
... [+37 authors] ...,
Valtteri Wirta
Floyd R.A. Wittink
Marc Zabeau
Ian Small

First Published October 15, 2004

A Non-EST-Based Method for Exon-Skipping Prediction

Rotem Sorek
Ronen Shemesh
Yuval Cohen
Ortal Basechess
Gil Ast
Ron Shamir

First Published August 2, 2004

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