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Method

Dynamics of intronic polyadenylation in the hematopoietic lineage and its regulation by DNA methylation

  • First Published April 13, 2026
Method

Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses

  • First Published February 14, 2020
Method

Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation

  • First Published February 2, 2015
Method

Mapping functional transcription factor networks from gene expression data

  • First Published May 1, 2013
Resource

Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines

  • First Published December 22, 2010
Method

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

  • First Published August 27, 2010
Letter

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention

  • First Published August 24, 2009
LETTER

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

  • First Published July 14, 2008
Methods

Targeted discovery of novel human exons by comparative genomics

  • First Published November 7, 2007
Methods

A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices

  • First Published January 8, 2007
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