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Research

Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing

  • Dorothee Pflueger
  • Stéphane Terry
  • Andrea Sboner
  • Lukas Habegger
  • Raquel Esgueva
  • Pei-Chun Lin Maria A. Svensson Naoki Kitabayashi Benjamin J. Moss Theresa Y. MacDonald Xuhong Cao Terrence Barrette Ashutosh K. Tewari Mark S. Chee Arul M. Chinnaiyan
  • ... [+10 authors] ...,
  • David S. Rickman
  • Francesca Demichelis
  • Mark B. Gerstein
  • Mark A. Rubin
  • First Published October 29, 2010
Method

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

  • Lukas Chavez
  • Justyna Jozefczuk
  • Christina Grimm
  • Jörn Dietrich
  • Bernd Timmermann
  • Hans Lehrach
  • Ralf Herwig
  • James Adjaye
  • First Published August 27, 2010
Letter

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention

  • Andrew L. Hufton
  • Susanne Mathia
  • Helene Braun
  • Udo Georgi
  • Hans Lehrach
  • Martin Vingron
  • Albert J. Poustka
  • Georgia Panopoulou
  • First Published August 24, 2009
Methods

Microarray-based multicycle-enrichment of genomic subsets for targeted next-generation sequencing

  • Daniel Summerer
  • Haiguo Wu
  • Bettina Haase
  • Yang Cheng
  • Nadine Schracke
  • Cord F. Stähler
  • Mark S. Chee
  • Peer F. Stähler
  • Markus Beier
  • First Published July 28, 2009
LETTER

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

  • Andrew L. Hufton
  • Detlef Groth
  • Martin Vingron
  • Hans Lehrach
  • Albert J. Poustka
  • Georgia Panopoulou
  • First Published July 14, 2008
Methods

High-throughput DNA methylation profiling using universal bead arrays

  • Marina Bibikova
  • Zhenwu Lin
  • Lixin Zhou
  • Eugene Chudin
  • Eliza Wickham Garcia
  • Bonnie Wu Dennis Doucet Neal J. Thomas Yunhua Wang Ekkehard Vollmer Torsten Goldmann Carola Seifart Wei Jiang
  • ... [+8 authors] ...,
  • David L. Barker
  • Mark S. Chee
  • Joanna Floros
  • Jian-Bing Fan
  • First Published January 31, 2006
Methods

A novel, high-performance random array platform for quantitative gene expression profiling

  • Kenneth Kuhn
  • Shawn C. Baker
  • Eugene Chudin
  • Minh-Ha Lieu
  • Steffen Oeser
  • Holly Bennett
  • ... [+1 authors] ...,
  • Philippe Rigault
  • David Barker
  • Timothy K. McDaniel
  • Mark S. Chee
  • First Published November 1, 2004
RESOURCE

Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications" > Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications

  • Pierre Hilson
  • Joke Allemeersch
  • Thomas Altmann
  • Sébastien Aubourg
  • Alexandra Avon
  • Jim Beynon Rishikesh P. Bhalerao Frédérique Bitton Michel Caboche Bernard Cannoot Vasil Chardakov Cécile Cognet-Holliger Vincent Colot Mark Crowe Caroline Darimont Steffen Durinck Holger Eickhoff Andéol Falcon de Longevialle Edward E. Farmer Murray Grant Martin T.R. Kuiper Hans Lehrach Céline Léon Antonio Leyva Joakim Lundeberg Claire Lurin Yves Moreau Wilfried Nietfeld Javier Paz-Ares Philippe Reymond Pierre Rouzé Goran Sandberg Maria Dolores Segura Carine Serizet Alexandra Tabrett Ludivine Taconnat Vincent Thareau Paul Van Hummelen Steven Vercruysse Marnik Vuylsteke Magdalena Weingartner Peter J. Weisbeek
  • ... [+37 authors] ...,
  • Valtteri Wirta
  • Floyd R.A. Wittink
  • Marc Zabeau
  • Ian Small
  • First Published October 15, 2004
LETTER

Transcript Level Alterations Reflect Gene Dosage Effects Across Multiple Tissues in a Mouse Model of Down Syndrome

  • Pascal Kahlem
  • Marc Sultan
  • Ralf Herwig
  • Matthias Steinfath
  • Daniela Balzereit
  • Barbara Eppens Nidhi G. Saran Mathew T. Pletcher Sarah T. South
  • ... [+4 authors] ...,
  • Gail Stetten
  • Hans Lehrach
  • Roger H. Reeves
  • Marie-Laure Yaspo
  • First Published July 1, 2004
Methods

A Versatile Assay for High-Throughput Gene Expression Profiling on Universal Array Matrices

  • Jian-Bing Fan
  • Joanne M. Yeakley
  • Marina Bibikova
  • Eugene Chudin
  • Eliza Wickham
  • Jing Chen Dennis Doucet Philippe Rigault Baohong Zhang Richard Shen Celeste McBride Hai-Ri Li
  • ... [+7 authors] ...,
  • Xiang-Dong Fu
  • Arnold Oliphant
  • David L. Barker
  • Mark S. Chee
  • First Published May 3, 2004
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