Search | Genome Research

CL_GR_CellEng_728x90

Your search for returned 38 results

Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

Miriam K. Konkel
Brygg Ullmer
Erika L. Arceneaux
Sreeja Sanampudi
Sarah A. Brantley
Robert Hubley
Arian F.A. Smit
Mark A. Batzer

First Published February 25, 2016

Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

David J. Witherspoon
Yuhua Zhang
Jinchuan Xing
W. Scott Watkins
Hongseok Ha
Mark A. Batzer
Lynn B. Jorde

First Published April 18, 2013

Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

David A. Ray
Mark A. Batzer

First Published June 1, 2011

Method

Computational analysis of genome-wide DNA methylation during the differentiation of human embryonic stem cells along the endodermal lineage

Lukas Chavez
Justyna Jozefczuk
Christina Grimm
Jörn Dietrich
Bernd Timmermann
Hans Lehrach
Ralf Herwig
James Adjaye

First Published August 27, 2010

Letter

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention

Andrew L. Hufton
Susanne Mathia
Helene Braun
Udo Georgi
Hans Lehrach
Martin Vingron
Albert J. Poustka
Georgia Panopoulou

First Published August 24, 2009

Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

Annette Damert
Julija Raiz
Axel V. Horn
Johannes Löwer
Hui Wang
Jinchuan Xing
Mark A. Batzer
Roswitha Löwer
Gerald G. Schumann

First Published August 3, 2009

Letter

Mobile elements create structural variation: Analysis of a complete human genome

Jinchuan Xing
Yuhua Zhang
Kyudong Han
Abdel Halim Salem
Shurjo K. Sen
Chad D. Huff Qiong Zhou
... [+2 authors] ...,
Ewen F. Kirkness
Samuel Levy
Mark A. Batzer
Lynn B. Jorde

First Published May 13, 2009

LETTER

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

Andrew L. Hufton
Detlef Groth
Martin Vingron
Hans Lehrach
Albert J. Poustka
Georgia Panopoulou

First Published July 14, 2008

LETTER

Monodelphis domestica" > Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

Andrew J. Gentles
Matthew J. Wakefield
Oleksiy Kohany
Wanjun Gu
Mark A. Batzer
David D. Pollock
Jerzy Jurka

First Published May 10, 2007

LETTER

Alu amplification" > Under the genomic radar: The Stealth model of Alu amplification

Kyudong Han
Jinchuan Xing
Hui Wang
Dale J. Hedges
Randall K. Garber
Richard Cordaux
Mark A. Batzer

First Published May 2, 2005

RESOURCE

Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications" > Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications

Pierre Hilson
Joke Allemeersch
Thomas Altmann
Sébastien Aubourg
Alexandra Avon
Jim Beynon Rishikesh P. Bhalerao Frédérique Bitton Michel Caboche Bernard Cannoot Vasil Chardakov Cécile Cognet-Holliger Vincent Colot Mark Crowe Caroline Darimont Steffen Durinck Holger Eickhoff Andéol Falcon de Longevialle Edward E. Farmer Murray Grant Martin T.R. Kuiper Hans Lehrach Céline Léon Antonio Leyva Joakim Lundeberg Claire Lurin Yves Moreau Wilfried Nietfeld Javier Paz-Ares Philippe Reymond Pierre Rouzé Goran Sandberg Maria Dolores Segura Carine Serizet Alexandra Tabrett Ludivine Taconnat Vincent Thareau Paul Van Hummelen Steven Vercruysse Marnik Vuylsteke Magdalena Weingartner Peter J. Weisbeek
... [+37 authors] ...,
Valtteri Wirta
Floyd R.A. Wittink
Marc Zabeau
Ian Small

First Published October 15, 2004

LETTER

Transcript Level Alterations Reflect Gene Dosage Effects Across Multiple Tissues in a Mouse Model of Down Syndrome

Pascal Kahlem
Marc Sultan
Ralf Herwig
Matthias Steinfath
Daniela Balzereit
Barbara Eppens Nidhi G. Saran Mathew T. Pletcher Sarah T. South
... [+4 authors] ...,
Gail Stetten
Hans Lehrach
Roger H. Reeves
Marie-Laure Yaspo

First Published July 1, 2004

LETTER

Alu Mobilization and Polymorphism Among the Human and Chimpanzee Lineages" > Differential Alu Mobilization and Polymorphism Among the Human and Chimpanzee Lineages

Dale J. Hedges
Pauline A. Callinan
Richard Cordaux
Jinchuan Xing
Erin Barnes
Mark A. Batzer

First Published June 1, 2004

RESOURCE

Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome

Martin Krzywinski
John Wallis
Claudia Gösele
Ian Bosdet
Readman Chiu
Tina Graves Oliver Hummel Dan Layman Carrie Mathewson Natasja Wye Baoli Zhu Derek Albracht Jennifer Asano Sarah Barber Mabel Brown-John Susanna Chan Steve Chand Alison Cloutier Jonathon Davito Chris Fjell Tony Gaige Detlev Ganten Noreen Girn Kurtis Guggenheimer Heinz Himmelbauer Thomas Kreitler Stephen Leach Darlene Lee Hans Lehrach Michael Mayo Kelly Mead Teika Olson Pawan Pandoh Anna-Liisa Prabhu Heesun Shin Simone Tänzer Jason Thompson Miranda Tsai Jason Walker George Yang Mandeep Sekhon LaDeana Hillier Heike Zimdahl Andre Marziali Kazutoyo Osoegawa Shaying Zhao Asim Siddiqui Pieter J. de Jong Wes Warren Elaine Mardis John D. McPherson Richard Wilson
... [+47 authors] ...,
Norbert Hübner
Steven Jones
Marco Marra
Jacqueline Schein

First Published April 1, 2004

LETTER

The Genomic Sequence and Comparative Analysis of the Rat Major Histocompatibility Complex

Peter Hurt
Lutz Walter
Ralf Sudbrak
Sven Klages
Ines Müller
Takashi Shiina Hidetoshi Inoko
... [+2 authors] ...,
Hans Lehrach
Eberhard Günther
Richard Reinhardt
Heinz Himmelbauer

First Published April 1, 2004

RESOURCE

Generation, Annotation, Evolutionary Analysis, and Database Integration of 20,000 Unique Sea Urchin EST Clusters

Albert J. Poustka
Detlef Groth
Steffen Hennig
Sabine Thamm
Andrew Cameron
Alfred Beck
... [+1 authors] ...,
Richard Reinhardt
Ralf Herwig
Georgia Panopoulou
Hans Lehrach

First Published December 1, 2003

Methods

Clone-Based Systematic Haplotyping (CSH): A Procedure for Physical Haplotyping of Whole Genomes

Carola Burgtorf
Pamela Kepper
Margret Hoehe
Carsten Schmitt
Richard Reinhardt
Hans Lehrach
Sascha Sauer

First Published December 1, 2003

LETTER

Alu Insertion Polymorphisms" > Genetic Variation Among World Populations: Inferences From 100 Alu Insertion Polymorphisms

W. Scott Watkins
Alan R. Rogers
Christopher T. Ostler
Steve Wooding
Michael J. Bamshad
Anna-Marie E. Brassington Marion L. Carroll Son V. Nguyen Jerilyn A. Walker B.V. Ravi Prasad
... [+5 authors] ...,
P. Govinda Reddy
Pradipta K. Das
Mark A. Batzer
Lynn B. Jorde

First Published June 12, 2003

ARTICLE

New Evidence for Genome-Wide Duplications at the Origin of Vertebrates Using an Amphioxus Gene Set and Completed Animal Genomes

Georgia Panopoulou
Steffen Hennig
Detlef Groth
Antje Krause
Albert J. Poustka
Ralf Herwig
Martin Vingron
Hans Lehrach

First Published June 1, 2003

LETTER

Y Chromosome STR Haplotypes and the Genetic Structure of U.S. Populations of African, European, and Hispanic Ancestry

Manfred Kayser
Silke Brauer
Hiltrud Schädlich
Mechthild Prinz
Mark A. Batzer
Peter A. Zimmerman
B. A. Boatin
Mark Stoneking

First Published April 1, 2003

REVIEW

Mammalian Retroelements

Prescott L. Deininger
Mark A. Batzer

First Published October 1, 2002

LETTER

Active Alu Element “A-Tails”: Size Does Matter

Astrid M. Roy-Engel
Abdel-Halim Salem
Oluwatosin O. Oyeniran
Lisa Deininger
Dale J. Hedges
Gail E. Kilroy
Mark A. Batzer
Prescott L. Deininger

First Published August 21, 2002

LETTER

Patterns of Human Diversity, within and among Continents, Inferred from Biallelic DNA Polymorphisms

Chiara Romualdi
David Balding
Ivane S. Nasidze
Gregory Risch
Myles Robichaux
Stephen T. Sherry
Mark Stoneking
Mark A. Batzer
Guido Barbujani

First Published April 1, 2002

RESOURCE

Advanced Integrated Mouse YAC Map Including BAC Framework

Leonard C. Schalkwyk
Brian Cusack
Ilona Dunkel
Martina Hopp
Markus Kramer
Stefanie Palczewski Jutta Piefke Sabine Scheel
... [+3 authors] ...,
Michael Weiher
Gunther Wenske
Hans Lehrach
Heinz Himmelbauer

First Published December 1, 2001

METHODS

A Human cDNA Expression Library in Yeast Enriched for Open Reading Frames

Caterina Holz
Angelika Lueking
Lara Bovekamp
Claudia Gutjahr
Natalia Bolotina
Hans Lehrach
Dolores J. Cahill

First Published September 20, 2001

RESOURCE

An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library

Matthew D. Clark
Steffen Hennig
Ralf Herwig
Sandy W. Clifton
Marco A. Marra
Hans Lehrach
Stephen L. Johnson
the WU-GSC EST Group

First Published August 16, 2001

LETTER

Genetic Evidence on the Origins of Indian Caste Populations

Michael Bamshad
Toomas Kivisild
W. Scott Watkins
Mary E. Dixon
Chris E. Ricker
Baskara B. Rao J. Mastan Naidu B.V. Ravi Prasad P. Govinda Reddy Arani Rasanayagam Surinder S. Papiha Richard Villems Alan J. Redd Michael F. Hammer
... [+9 authors] ...,
Son V. Nguyen
Marion L. Carroll
Mark A. Batzer
Lynn B. Jorde

First Published May 8, 2001

LETTER

Reading between the LINEs: Human Genomic Variation Induced by LINE-1 Retrotransposition

Fang-miin Sheen
Stephen T. Sherry
Gregory M. Risch
Myles Robichaux
Ivane Nasidze
Mark Stoneking
Mark A. Batzer
Gary D. Swergold

First Published October 1, 2000

ARTICLE

Potential Gene Conversion and Source Genes for Recently Integrated Alu Elements

Astrid M. Roy
Marion L. Carroll
Son V. Nguyen
Abdel-Halim Salem
Michael Oldridge
Andrew O. M. Wilkie
Mark A. Batzer
Prescott L. Deininger

First Published October 1, 2000

LETTER

Large-Scale Clustering of cDNA-Fingerprinting Data

Ralf Herwig
Albert J. Poustka
Christine Müller
Christof Bull
Hans Lehrach
John O'Brien

First Published November 1, 1999

RESOURCE

Panel of Microsatellite Markers for Whole-Genome Scans and Radiation Hybrid Mapping and a Mouse Family Tree

Leonard C. Schalkwyk
Martin Jung
Angelika Daser
Michael Weiher
Jörn Walter
Heinz Himmelbauer
Hans Lehrach

First Published September 1, 1999

LETTER

A Contiguous 3-Mb Sequence-Ready Map in the S3–MX Region on 21q22.2 Based on High- Throughput Nonisotopic Library Screenings

Thomas Hildmann
Xianging Kong
John O’Brien
Lisa Riesselman
Hoang-My Christensen
Emilie Dagand
Hans Lehrach
Marie-Laure Yaspo

First Published April 1, 1999

LETTER

Aire Gene: Comparative Genomic Sequencing, Gene Organization, and Expression" > The Mouse Aire Gene: Comparative Genomic Sequencing, Gene Organization, and Expression

Karin Blechschmidt
Michal Schweiger
Karin Wertz
Richard Poulson
Hoang-My Christensen
Andre Rosenthal
Hans Lehrach
Marie-Laure Yaspo

First Published February 1, 1999

RESEARCH

Estimation of Distances and Map Construction Using Radiation Hybrids

William Newell
Stephan Beck
Hans Lehrach
Andrew Lyall

First Published May 1, 1998

LETTER

Bacterial Contig Map of the 21q11 Region Associated with Alzheimer’s Disease and Abnormal Myelopoiesis in Down Syndrome

Jürgen Groet
Jane H. Ives
Andrew P. South
Pedro R. Baptista
Tania A. Jones
Marie-Laure Yaspo
... [+1 authors] ...,
Hans Lehrach
Marie-Claude Potier
Christine Van Broeckhoven
Dean Nižetić

First Published April 1, 1998

LETTER

AluInsertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa " > AluInsertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa

Mark Stoneking
Jennifer J. Fontius
Stephanie L. Clifford
Himla Soodyall
Santosh S. Arcot
Nilmani Saha
... [+1 authors] ...,
Trefor Jenkins
Mohammad A. Tahir
Prescott L. Deininger
Mark A. Batzer

First Published November 1, 1997

INSIGHT/OUTLOOK

Modeling Human Evolution—To Tree or Not to Tree?

Stephen T. Sherry
Mark A. Batzer

First Published October 1, 1997

RESEARCH

PEX Gene Mutated in X-Linked Dominant Hypophosphatemic Rickets" > Genomic Organization of the Human PEX Gene Mutated in X-Linked Dominant Hypophosphatemic Rickets

Fiona Francis
Tim M. Strom
Steffen Hennig
Annett Böddrich
Bettina Lorenz
Oliver Brandau Klaus L. Mohnike Michele Cagnoli Christina Steffens Sven Klages Katja Borzym Thomas Pohl Claudine Oudet Michael J. Econs
... [+9 authors] ...,
Peter S.N. Rowe
Richard Reinhardt
Thomas Meitinger
Hans Lehrach

First Published June 1, 1997