Method
Ancestry-agnostic estimation of DNA sample contamination from sequence reads
- First Published January 24, 2020
Corrigendum
Corrigendum: Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland
- First Published September 1, 2017
Research
Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion
- First Published June 6, 2017
Research
Multiple major disease-associated clones of Legionella pneumophila have emerged recently and independently
- First Published September 23, 2016
Research
A decade of genomic history for healthcare-associated Enterococcus faecium in the United Kingdom and Ireland
- First Published August 15, 2016
Research
Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland
- First Published July 18, 2016
Resource
Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland
- First Published December 15, 2015
Research
Genome specialization and decay of the strangles pathogen, Streptococcus equi, is driven by persistent infection
- First Published July 9, 2015
Method
An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data
- First Published April 16, 2015
Erratum
Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles
- First Published April 1, 2015
Research
Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting
- First Published December 9, 2014
Research
Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles
- First Published September 18, 2014
Research
The influence of genomic context on mutation patterns in the human genome inferred from rare variants
- First Published August 29, 2013
Method
Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture
- First Published March 22, 2013
Research
A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic
- First Published January 8, 2013
Research
Microevolution of extensively drug-resistant tuberculosis in Russia
- First Published January 31, 2012
Resource
Low-coverage sequencing: Implications for design of complex trait association studies
- First Published April 1, 2011
Letter
Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype
- First Published November 9, 2009
Methods
Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
- First Published October 13, 2009
LETTER
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis
- First Published April 10, 2008
Methods
Resolving the structural features of genomic islands: A machine learning approach
- First Published December 10, 2007
LETTER
Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates
- First Published November 21, 2007
LETTER
Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes
- First Published May 22, 2007
LETTER
Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer
- First Published January 8, 2007
LETTER
A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?
- First Published November 7, 2006
LETTER
Sequence features in regions of weak and strong linkage disequilibrium
- First Published October 26, 2005
ARTICLE
The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation
- First Published April 18, 2005
LETTER
Whole Genome Comparison of Campylobacter jejuni Human Isolates Using a Low-Cost Microarray Reveals Extensive Genetic Diversity
- First Published September 20, 2001