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Method

Accurate sequencing of DNA motifs able to form alternative (non-B) structures

  • First Published July 11, 2023
Research

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome

  • First Published June 29, 2021
Research

Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate

  • First Published November 6, 2018
Research

Selfish mutations dysregulating RAS-MAPK signaling are pervasive in aged human testes

  • First Published October 24, 2018
Corrigendum

Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?

  • First Published October 3, 2016
Research

A functional methylome map of ulcerative colitis

  • First Published July 23, 2012
Research

A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?

  • First Published March 28, 2012
Research

A matter of life or death: How microsatellites emerge in and vanish from the human genome

  • First Published October 12, 2011
Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

  • First Published July 27, 2011
Research

Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors

  • First Published February 1, 2011
Research

Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer

  • First Published March 10, 2010
Article

Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression

  • First Published November 3, 2009
Resource

Windshield splatter analysis with the Galaxy metagenomic pipeline

  • First Published October 9, 2009
Letter

Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions

  • First Published June 5, 2009
LETTER

Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex

  • First Published October 10, 2008
LETTER

Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif

  • First Published September 25, 2008
RESOURCE

An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)

  • First Published June 24, 2008
LETTER

The genome-wide determinants of human and chimpanzee microsatellite evolution

  • First Published November 21, 2007
LETTER

cis-regulatory elements using comparative genomics: Some lessons from ENCODE data" > Finding cis-regulatory elements using comparative genomics: Some lessons from ENCODE data

  • First Published June 13, 2007
Methods

ESPERR: Learning strong and weak signals in genomic sequence alignments to identify functional elements

  • First Published October 19, 2006
LETTER

cis-regulatory modules" > Experimental validation of predicted mammalian erythroid cis-regulatory modules

  • First Published October 12, 2006
LETTER

KIR) loci in primates" > Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates

  • First Published January 3, 2005
RESOURCE

Complete MHC Haplotype Sequencing for Common Disease Gene Mapping

  • First Published May 12, 2004
Methods

Regulatory Potential Scores From Genome-Wide Three-Way Alignments of Human, Mouse, and Rat

  • First Published April 1, 2004
LETTER

Insertions and Deletions Are Male Biased Too: A Whole-Genome Analysis in Rodents

  • First Published April 1, 2004
ARTICLE

Patterns of Insertions and Their Covariation With Substitutions in the Rat, Mouse, and Human Genomes

  • First Published April 1, 2004
LETTER

Gene Length and Proximity to Neighbors Affect Genome-Wide Expression Levels

  • First Published January 1, 2003
LETTER

Distinguishing Regulatory DNA From Neutral Sites

  • First Published January 1, 2003
ARTICLE

Covariation in Frequencies of Substitution, Deletion, Transposition, and Recombination During Eutherian Evolution

  • First Published January 1, 2003
REPORT

Characterization of Clustered MHC-Linked Olfactory Receptor Genes in Human and Mouse

  • First Published March 13, 2001
LETTER

MHC-Linked Olfactory Receptor Loci Exhibit Polymorphism and Contribute to Extended HLA/OR-Haplotypes

  • First Published December 1, 2000
LETTER

Construction of a High-Resolution 2.5-Mb Transcript Map of the Human 6p21.2–6p21.3 Region Immediately Centromeric of the Major Histocompatibility Complex

  • First Published April 1, 2000
RESEARCH

Estimation of Distances and Map Construction Using Radiation Hybrids

  • First Published May 1, 1998
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