Search | Genome Research

Method

Accurate sequencing of DNA motifs able to form alternative (non-B) structures

Matthias H. Weissensteiner
Marzia A. Cremona
Wilfried M. Guiblet
Nicholas Stoler
Robert S. Harris
Monika Cechova
... [+1 authors] ...,
Kristin A. Eckert
Francesca Chiaromonte
Yi-Fei Huang
Kateryna D. Makova

First Published July 11, 2023

Research

Gaps and complex structurally variant loci in phased genome assemblies

David Porubsky
Mitchell R. Vollger
William T. Harvey
Allison N. Rozanski
Peter Ebert
Glenn Hickey Patrick Hasenfeld Ashley D. Sanders Catherine Stober Jan O. Korbel Benedict Paten Tobias Marschall Evan E. Eichler Haley J. Abel Lucinda L. Antonacci-Fulton Mobin Asri Gunjan Baid Carl A. Baker Anastasiya Belyaeva Konstantinos Billis Guillaume Bourque Silvia Buonaiuto Andrew Carroll Mark J.P. Chaisson Pi-Chuan Chang Xian H. Chang Haoyu Cheng Justin Chu Sarah Cody Vincenza Colonna Daniel E. Cook Robert M. Cook-Deegan Omar E. Cornejo Mark Diekhans Daniel Doerr Peter Ebert Jana Ebler Evan E. Eichler Jordan M. Eizenga Susan Fairley Olivier Fedrigo Adam L. Felsenfeld Xiaowen Feng Christian Fischer Paul Flicek Giulio Formenti Adam Frankish Robert S. Fulton Yan Gao Shilpa Garg Erik Garrison Nanibaa’ A. Garrison Carlos Garcia Giron Richard E. Green Cristian Groza Andrea Guarracino Leanne Haggerty Ira M. Hall William T. Harvey Marina Haukness David Haussler Simon Heumos Glenn Hickey Kendra Hoekzema Thibaut Hourlier Kerstin Howe Miten Jain Erich D. Jarvis Hanlee P. Ji Eimear E. Kenny Barbara A. Koenig Alexey Kolesnikov Jan O. Korbel Jennifer Kordosky Sergey Koren HoJoon Lee Alexandra P. Lewis Heng Li Wen-Wei Liao Shuangjia Lu Tsung-Yu Lu Julian K. Lucas Hugo Magalhães Santiago Marco-Sola Pierre Marijon Charles Markello Tobias Marschall Fergal J. Martin Ann McCartney Jennifer McDaniel Karen H. Miga Matthew W. Mitchell Jean Monlong Jacquelyn Mountcastle Katherine M. Munson Moses Njagi Mwaniki Maria Nattestad Adam M. Novak Sergey Nurk Hugh E. Olsen Nathan D. Olson Benedict Paten Trevor Pesout Adam M. Phillippy Alice B. Popejoy David Porubsky Pjotr Prins Daniela Puiu Mikko Rautiainen Allison A. Regier Arang Rhie Samuel Sacco Ashley D. Sanders Valerie A. Schneider Baergen I. Schultz Kishwar Shafin Jonas A. Sibbesen Jouni Sirén Michael W. Smith Heidi J. Sofia Ahmad N. Abou Tayoun Françoise Thibaud-Nissen Chad Tomlinson Francesca Floriana Tricomi Flavia Villani Mitchell R. Vollger Justin Wagner Brian Walenz
... [+123 authors] ...,
Ting Wang
Jonathan M.D. Wood
Aleksey V. Zimin
Justin M. Zook

First Published May 10, 2023

Research

Xiphophorus species provide new insights into microevolution, hybrid incompatibility, and epistasis" > High resolution genomes of multiple Xiphophorus species provide new insights into microevolution, hybrid incompatibility, and epistasis

Yuan Lu
Edward Rice
Kang Du
Susanne Kneitz
Magali Naville
Corentin Dechaud Jean-Nicolas Volff Mikki Boswell William Boswell LaDeana Hillier Chad Tomlinson
... [+6 authors] ...,
Kremitzki Milin
Ronald B. Walter
Manfred Schartl
Wesley C. Warren

First Published May 5, 2023

Research

Diversity, duplication, and genomic organization of homeobox genes in Lepidoptera

Peter O. Mulhair
Liam Crowley
Douglas H. Boyes
Amber Harper
Owen T. Lewis
Peter W.H. Holland Mark Blaxter Nova Mieszkowska Federica Di Palma Peter Holland Richard Durbin Thomas Richards Matthew Berriman Paul Kersey Peter Hollingsworth Willie Wilson Alex Twyford Ester Gaya Mara Lawniczak Owen Lewis Gavin Broad
... [+16 authors] ...,
Kevin Howe
Michelle Hart
Paul Flicek
Ian Barnes

First Published December 8, 2022

Research

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome

Wilfried M. Guiblet
Michael DeGiorgio
Xiaoheng Cheng
Francesca Chiaromonte
Kristin A. Eckert
Yi-Fei Huang
Kateryna D. Makova

First Published June 29, 2021

Research

Fixation of allelic gene expression landscapes and expression bias pattern shape the transcriptome of the clonal Amazon molly

Yuan Lu
David Bierbach
Jenny Ormanns
Wesley C. Warren
Ronald B. Walter
Manfred Schartl

First Published February 5, 2021

Research

Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages

Jennifer F. Hughes
Helen Skaletsky
Tatyana Pyntikova
Natalia Koutseva
Terje Raudsepp
Laura G. Brown Daniel W. Bellott Ting-Jan Cho Shannon Dugan-Rocha Ziad Khan Colin Kremitzki Catrina Fronick Tina A. Graves-Lindsay Lucinda Fulton Wesley C. Warren Richard K. Wilson Elaine Owens James E. Womack William J. Murphy Donna M. Muzny
... [+15 authors] ...,
Kim C. Worley
Bhanu P. Chowdhary
Richard A. Gibbs
David C. Page

First Published November 18, 2020

Research

Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma

Raquel Ordoñez
Marta Kulis
Nuria Russiñol
Vicente Chapaprieta
Arantxa Carrasco-Leon
Beatriz García-Torre Stella Charalampopoulou Guillem Clot Renée Beekman Cem Meydan Martí Duran-Ferrer Núria Verdaguer-Dot Roser Vilarrasa-Blasi Paula Soler-Vila Leire Garate Estíbaliz Miranda Edurne San José-Enériz Juan R. Rodriguez-Madoz Teresa Ezponda Rebeca Martínez-Turrilas Amaia Vilas-Zornoza David Lara-Astiaso Daphné Dupéré-Richer Joost H.A. Martens Halima El-Omri Ruba Y. Taha Maria J. Calasanz Bruno Paiva Jesus San Miguel Paul Flicek Ivo Gut Ari Melnick Constantine S. Mitsiades Jonathan D. Licht Elias Campo
... [+30 authors] ...,
Hendrik G. Stunnenberg
Xabier Agirre
Felipe Prosper
Jose I. Martin-Subero

First Published August 20, 2020

Resource

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

Mats E. Pettersson
Christina M. Rochus
Fan Han
Junfeng Chen
Jason Hill
Ola Wallerman Guangyi Fan Xiaoning Hong Qiwu Xu He Zhang Shanshan Liu Xin Liu Leanne Haggerty Toby Hunt Fergal J. Martin
... [+10 authors] ...,
Paul Flicek
Ignas Bunikis
Arild Folkvord
Leif Andersson

First Published October 24, 2019

Research

Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks

Marta Farré
Jaebum Kim
Anastasia A. Proskuryakova
Yang Zhang
Anastasia I. Kulemzina
Qiye Li Yang Zhou Yingqi Xiong Jennifer L. Johnson Polina L. Perelman Warren E. Johnson Wesley C. Warren Anna V. Kukekova Guojie Zhang Stephen J. O'Brien Oliver A. Ryder
... [+11 authors] ...,
Alexander S. Graphodatsky
Jian Ma
Harris A. Lewin
Denis M. Larkin

First Published February 13, 2019

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Your search for returned 58 results

Method

Accurate sequencing of DNA motifs able to form alternative (non-B) structures

Research

Gaps and complex structurally variant loci in phased genome assemblies

Research

Xiphophorus species provide new insights into microevolution, hybrid incompatibility, and epistasis" > High resolution genomes of multiple Xiphophorus species provide new insights into microevolution, hybrid incompatibility, and epistasis

Research

Diversity, duplication, and genomic organization of homeobox genes in Lepidoptera

Research

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome

Research

Fixation of allelic gene expression landscapes and expression bias pattern shape the transcriptome of the clonal Amazon molly

Research

Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages

Research

Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma

Resource

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

Research

Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks

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