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Method

A biobank-scale method for learning modulators of gene-environment interaction underlying human complex traits from multiple environmental exposures

  • Zhengtong Liu
  • Arush Ramteke
  • Aakarsh Anand
  • Aditya Gorla
  • Moonseong Jeong
  • Sriram Sankararaman
  • First Published August 18, 2026
Editorial

RECOMB 2025 Special Issue

  • Sriram Sankararaman
  • Bonnie Berger
  • First Published December 3, 2025
Method

A scalable adaptive quadratic kernel method for interpretable epistasis analysis in complex traits

  • Boyang Fu
  • Prateek Anand
  • Aakarsh Anand
  • Joel Mefford
  • Sriram Sankararaman
  • First Published August 29, 2024
Method

Scalable summary-statistics-based heritability estimation method with individual genotype level accuracy

  • Moonseong Jeong
  • Ali Pazokitoroudi
  • Zhengtong Liu
  • Sriram Sankararaman
  • First Published July 22, 2024
Method

Leveraging family data to design Mendelian randomization that is provably robust to population stratification

  • Nathan LaPierre
  • Boyang Fu
  • Steven Turnbull
  • Eleazar Eskin
  • Sriram Sankararaman
  • First Published May 17, 2023
Research

Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion

  • James Hadfield
  • Simon R. Harris
  • Helena M.B. Seth-Smith
  • Surendra Parmar
  • Patiyan Andersson
  • Philip M. Giffard Julius Schachter Jeanne Moncada Louise Ellison María Lucía Gallo Vaulet Marcelo Rodríguez Fermepin Frans Radebe Suyapa Mendoza Sander Ouburg Servaas A. Morré Konrad Sachse Mirja Puolakkainen Suvi J. Korhonen Chris Sonnex Rebecca Wiggins Hamid Jalal Tamara Brunelli Patrizia Casprini Rachel Pitt Cathy Ison Alevtina Savicheva Elena Shipitsyna Ronza Hadad Laszlo Kari Matthew J. Burton David Mabey Anthony W. Solomon David Lewis Peter Marsh
  • ... [+29 authors] ...,
  • Magnus Unemo
  • Ian N. Clarke
  • Julian Parkhill
  • Nicholas R. Thomson
  • First Published June 6, 2017
Method

Estimating and interpreting FST: The impact of rare variants

  • Gaurav Bhatia
  • Nick Patterson
  • Sriram Sankararaman
  • Alkes L. Price
  • First Published July 16, 2013
Method

Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture

  • Helena M.B. Seth-Smith
  • Simon R. Harris
  • Rachel J. Skilton
  • Frans M. Radebe
  • Daniel Golparian
  • Elena Shipitsyna Pham Thanh Duy Paul Scott Lesley T. Cutcliffe Colette O’Neill Surendra Parmar Rachel Pitt Stephen Baker Catherine A. Ison Peter Marsh Hamid Jalal David A. Lewis
  • ... [+12 authors] ...,
  • Magnus Unemo
  • Ian N. Clarke
  • Julian Parkhill
  • Nicholas R. Thomson
  • First Published March 22, 2013
Research

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

  • Chao Cheng
  • Roger Alexander
  • Renqiang Min
  • Jing Leng
  • Kevin Y. Yip
  • Joel Rozowsky Koon-Kiu Yan Xianjun Dong Sarah Djebali Yijun Ruan Carrie A. Davis Piero Carninci Timo Lassman Thomas R. Gingeras Roderic Guigó
  • ... [+10 authors] ...,
  • Ewan Birney
  • Zhiping Weng
  • Michael Snyder
  • Mark Gerstein
  • First Published September 5, 2012
Resource

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

  • Jie Wang
  • Jiali Zhuang
  • Sowmya Iyer
  • XinYing Lin
  • Troy W. Whitfield
  • Melissa C. Greven Brian G. Pierce Xianjun Dong Anshul Kundaje Yong Cheng Oliver J. Rando Ewan Birney
  • ... [+7 authors] ...,
  • Richard M. Myers
  • William S. Noble
  • Michael Snyder
  • Zhiping Weng
  • First Published September 5, 2012
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