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Your search for returned 13 results

Method

Spatial Cellular Networks from omics data with SpaCeNet

Stefan Schrod
Niklas Lück
Robert Lohmayer
Stefan Solbrig
Dennis Völkl
Tina Wipfler Katherine H. Shutta Marouen Ben Guebila Andreas Schäfer Tim Beißbarth
... [+5 authors] ...,
Helena U. Zacharias
Peter J. Oefner
John Quackenbush
Michael Altenbuchinger

First Published September 4, 2024

Method

Bayesian inference of sample-specific coexpression networks

Enakshi Saha
Viola Fanfani
Panagiotis Mandros
Marouen Ben Guebila
Jonas Fischer
Katherine H. Shutta
Dawn L. DeMeo
Camila M. Lopes-Ramos
John Quackenbush

First Published August 12, 2024

Method

Predicting genotype-specific gene regulatory networks

Deborah Weighill
Marouen Ben Guebila
Kimberly Glass
John Quackenbush
John Platig

First Published February 22, 2022

Methods

SyMAP: A system for discovering and viewing syntenic regions of FPC maps

Carol Soderlund
William Nelson
Austin Shoemaker
Andrew Paterson

First Published September 1, 2006

LETTER

Uneven chromosome contraction and expansion in the maize genome

Rémy Bruggmann
Arvind K. Bharti
Heidrun Gundlach
Jinsheng Lai
Sarah Young
Ana C. Pontaroli Fusheng Wei Georg Haberer Galina Fuks Chunguang Du Christina Raymond Matt C. Estep Renyi Liu Jeffrey L. Bennetzen Agnes P. Chan Pablo D. Rabinowicz John Quackenbush W. Brad Barbazuk Rod A. Wing Bruce Birren
... [+15 authors] ...,
Chad Nusbaum
Steve Rounsley
Klaus F.X. Mayer
Joachim Messing

First Published August 10, 2006

RESOURCE

Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza" > The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza

Jetty S.S. Ammiraju
Meizhong Luo
José L. Goicoechea
Wenming Wang
Dave Kudrna
Christopher Mueller Jayson Talag HyeRan Kim Nicholas B. Sisneros Barbara Blackmon Eric Fang Jeffery B. Tomkins Darshan Brar David MacKill Susan McCouch Nori Kurata Georgina Lambert David W. Galbraith K. Arumuganathan Kiran Rao Jason G. Walling Navdeep Gill Yeisoo Yu
... [+18 authors] ...,
Phillip SanMiguel
Carol Soderlund
Scott Jackson
Rod A. Wing

First Published December 12, 2005

LETTER

Continued Discovery of Transcriptional Units Expressed in Cells of the Mouse Mononuclear Phagocyte Lineage

Christine A. Wells
Timothy Ravasi
Razvan Sultana
Ken Yagi
Piero Carninci
Hidemasa Bono Geoffrey Faulkner
... [+2 authors] ...,
Yasushi Okazaki
John Quackenbush
David A. Hume
Paul A. Lyons

First Published June 2, 2003

RESOURCE

Development and Evaluation of an Automated Annotation Pipeline and cDNA Annotation System

Takeya Kasukawa
Masaaki Furuno
Itoshi Nikaido
Hidemasa Bono
David A. Hume
Carol Bult David P. Hill Richard Baldarelli Julian Gough Alexander Kanapin Hideo Matsuda
... [+6 authors] ...,
Lynn M. Schriml
Yoshihide Hayashizaki
Yasushi Okazaki
John Quackenbush

First Published June 2, 2003

ARTICLE

Arabidopsis Chromosome 2 Using a Genomic DNA Amplicon Microarray" > Gene Expression Analyses of Arabidopsis Chromosome 2 Using a Genomic DNA Amplicon Microarray

Heenam Kim
Erik C. Snesrud
Brian Haas
Foo Cheung
Christopher D. Town
John Quackenbush

First Published March 1, 2003

RESOURCE

Cross-Referencing Eukaryotic Genomes: TIGR Orthologous Gene Alignments (TOGA)

Yuandan Lee
Razvan Sultana
Geo Pertea
Jennifer Cho
Svetlana Karamycheva
Jennifer Tsai Babak Parvizi Foo Cheung Valentin Antonescu
... [+4 authors] ...,
Joseph White
Ingeborg Holt
Feng Liang
John Quackenbush

First Published March 1, 2002

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