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Method

Optimal marker genes for c-separated cell types with SepSolve

  • First Published October 9, 2025
Method

Partial alignment of multislice spatially resolved transcriptomics data

  • First Published August 8, 2023
Method

Linear-time cluster ensembles of large-scale single-cell RNA-seq and multimodal data

  • First Published February 24, 2021
Method

Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples

  • First Published September 4, 2020
Method

Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors

  • First Published October 13, 2017
Resource

GenomeVIP: a cloud platform for genomic variant discovery and interpretation

  • First Published May 18, 2017
Method

Read clouds uncover variation in complex regions of the human genome

  • First Published August 18, 2015
Method

Parente2: a fast and accurate method for detecting identity by descent

  • First Published October 1, 2014
Research

Genome evolution during progression to breast cancer

  • First Published April 8, 2013
Method

Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements

  • First Published September 5, 2012
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