Method
Optimal marker genes for c-separated cell types with SepSolve
- First Published October 9, 2025
Research
Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation
- First Published December 5, 2024
Method
Partial alignment of multislice spatially resolved transcriptomics data
- First Published August 8, 2023
Method
Linear-time cluster ensembles of large-scale single-cell RNA-seq and multimodal data
- First Published February 24, 2021
Method
Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples
- First Published September 4, 2020
Research
High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma
- First Published June 27, 2019
Method
Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors
- First Published October 13, 2017
Resource
GenomeVIP: a cloud platform for genomic variant discovery and interpretation
- First Published May 18, 2017
Method
TITAN: inference of copy number architectures in clonal cell populations from tumor whole-genome sequence data
- First Published July 24, 2014
Method
Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm
- First Published June 26, 2013