Method
Optimal marker genes for c-separated cell types with SepSolve
- First Published October 9, 2025
Method
Partial alignment of multislice spatially resolved transcriptomics data
- First Published August 8, 2023
Method
Linear-time cluster ensembles of large-scale single-cell RNA-seq and multimodal data
- First Published February 24, 2021
Method
Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples
- First Published September 4, 2020
Method
Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors
- First Published October 13, 2017
Resource
GenomeVIP: a cloud platform for genomic variant discovery and interpretation
- First Published May 18, 2017
Research
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
- First Published September 5, 2012
Resource
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
- First Published September 5, 2012
Research
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells
- First Published November 16, 2011
Resource
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
- First Published July 12, 2011