Research
Combined effects of Ret coding and enhancer loss-of-function alleles cause progressive loss of inhibitory motor neurons in the enteric nervous system
- First Published September 16, 2026
Research
Epigenetic characterization of pseudogenes across human tissues
- First Published April 15, 2026
Resource
Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships
- First Published October 22, 2024
Research
A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease
- First Published November 15, 2021
Method
Sequence-based correction of barcode bias in massively parallel reporter assays
- First Published July 20, 2021
Method
Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants
- First Published August 23, 2018
Research
Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes
- First Published March 21, 2018
Research
Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division
- First Published September 11, 2013
Research
The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes
- First Published March 11, 2013
Research
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
- First Published September 5, 2012
Resource
GENCODE: The reference human genome annotation for The ENCODE Project
- First Published September 5, 2012
Resource
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- First Published September 5, 2012
Resource
CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing
- First Published February 7, 2011
Research
Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans
- First Published December 22, 2010
Methods
MSB: A mean-shift-based approach for the analysis of structural variation in the genome
- First Published November 26, 2008
LETTER
A genomic analysis of RNA polymerase II modification and chromatin architecture related to 3′ end RNA polyadenylation
- First Published May 16, 2008
LETTER
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
- First Published February 7, 2008
LETTER
Assessing the limits of genomic data integration for predicting protein networks
- First Published July 5, 2005
Methods
On the probability that a novel variant is a disease-causing mutation
- First Published June 17, 2005
LETTER
Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles
- First Published May 2, 2005
Methods
Annotation Transfer Between Genomes: Protein–Protein Interologs and Protein–DNA Regulogs
- First Published June 1, 2004
LETTER
The Human MitoChip: A High-Throughput Sequencing Microarray for Mitochondrial Mutation Detection
- First Published May 3, 2004
LETTER
Millions of Years of Evolution Preserved: A Comprehensive Catalog of the Processed Pseudogenes in the Human Genome
- First Published December 1, 2003
RESOURCE
Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans
- First Published October 2, 2003
METHODS
Spectral Biclustering of Microarray Data: Coclustering Genes and Conditions
- First Published April 1, 2003
ARTICLE
Linkage Disequilibrium and Haplotype Diversity in the Genes of the Renin–Angiotensin System: Findings From the Family Blood Pressure Program
- First Published January 14, 2003
LETTER
Systematic Learning of Gene Functional Classes From DNA Array Expression Data by Using Multilayer Perceptrons
- First Published November 1, 2002
ARTICLE
Identification and Analysis of Over 2000 Ribosomal Protein Pseudogenes in the Human Genome
- First Published October 1, 2002
RESOURCE
viewGene : A Graphical Tool for Polymorphism Visualization and Characterization
- First Published February 1, 2002
LETTER
Molecular Fossils in the Human Genome: Identification and Analysis of the Pseudogenes in Chromosomes 21 and 22
- First Published February 1, 2002
LETTER
Relating Whole-Genome Expression Data with Protein-Protein Interactions
- First Published January 1, 2002
METHODS
High-Throughput Variation Detection and Genotyping Using Microarrays
- First Published October 15, 2001
LETTER
Annotation Transfer for Genomics: Measuring Functional Divergence in Multi-Domain Proteins
- First Published October 1, 2001
INSIGHT/OUTLOOK
Interrelating Different Types of Genomic Data, from Proteome to Secretome: 'Oming in on Function
- First Published September 1, 2001
COMMENTARY
The Human Genome Sequence Expedition: Views from the “Base Camp”
- First Published May 1, 2001
ARTICLE
Patterns of Meiotic Recombination on the Long Arm of Human Chromosome 21
- First Published September 1, 2000
LETTER
Whole-genome Trees Based on the Occurrence of Folds and Orthologs: Implications for Comparing Genomes on Different Levels
- First Published June 1, 2000
LETTER
Parallel Genotyping of Human SNPs Using Generic High-density Oligonucleotide Tag Arrays
- First Published June 1, 2000
ARTICLE
The Sox10Dom Mouse: Modeling the Genetic Variation of Waardenburg-Shah (WS4) Syndrome
- First Published March 1, 1999
INSIGHT/OUTLOOK
A DNA Polymorphism Discovery Resource for Research on Human Genetic Variation
- First Published December 1, 1998
RESEARCH
Allele Frequency Distributions in Pooled DNA Samples: Applications to Mapping Complex Disease Genes
- First Published February 1, 1998