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Resource

Precision environmental health monitoring by longitudinal exposome and multi-omics profiling

  • Peng Gao
  • Xiaotao Shen
  • Xinyue Zhang
  • Chao Jiang
  • Sai Zhang
  • Xin Zhou
  • Sophia Miryam Schüssler-Fiorenza Rose
  • Michael Snyder
  • First Published June 6, 2022
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

  • Sumantra Chatterjee
  • Kameko M. Karasaki
  • Lauren E. Fries
  • Ashish Kapoor
  • Aravinda Chakravarti
  • First Published November 15, 2021
Method

Sequence-based correction of barcode bias in massively parallel reporter assays

  • Dongwon Lee
  • Ashish Kapoor
  • Changhee Lee
  • Michael Mudgett
  • Michael A. Beer
  • Aravinda Chakravarti
  • First Published July 20, 2021
Method

MAnorm2 for quantitatively comparing groups of ChIP-seq samples

  • Shiqi Tu
  • Mushan Li
  • Haojie Chen
  • Fengxiang Tan
  • Jian Xu
  • David J. Waxman
  • Yijing Zhang
  • Zhen Shao
  • First Published November 18, 2020
Method

Parallel bimodal single-cell sequencing of transcriptome and chromatin accessibility

  • Qiao Rui Xing
  • Chadi A El Farran
  • Ying Ying Zeng
  • Yao Yi
  • Tushar Warrier
  • Pradeep Gautam James J. Collins Jian Xu Peter Dröge
  • ... [+4 authors] ...,
  • Cheng-Gee Koh
  • Hu Li
  • Li-Feng Zhang
  • Yuin-Han Loh
  • First Published July 22, 2020
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • Dongwon Lee
  • Ashish Kapoor
  • Alexias Safi
  • Lingyun Song
  • Marc K. Halushka
  • Gregory E. Crawford
  • Aravinda Chakravarti
  • First Published August 23, 2018
Method

Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome

  • Hagen Tilgner
  • Fereshteh Jahanbani
  • Ishaan Gupta
  • Paul Collier
  • Eric Wei
  • Morten Rasmussen
  • Michael Snyder
  • First Published December 1, 2017
Research

C. elegans insulin networks" > Complex expression dynamics and robustness in C. elegans insulin networks

  • Ashlyn D. Ritter
  • Yuan Shen
  • Juan Fuxman Bass
  • Sankarganesh Jeyaraj
  • Bart Deplancke
  • Arnab Mukhopadhyay
  • ... [+1 authors] ...,
  • Jian Xu
  • Monica Driscoll
  • Heidi A. Tissenbaum
  • Albertha J.M. Walhout
  • First Published March 28, 2013
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