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Research

Combined effects of Ret coding and enhancer loss-of-function alleles cause progressive loss of inhibitory motor neurons in the enteric nervous system

Lauren E. Fries
Gabriel Grullon
Lauren Wilkes
Hanna E. Berk-Rauch
Aravinda Chakravarti
Sumantra Chatterjee

First Published September 16, 2026

In memoriam

Jim Watson (1928–2025): a genomics visionary

Aravinda Chakravarti
Evan E. Eichler
Anne C. Ferguson-Smith
Richard A. Gibbs
Eric D. Green
John R. Inglis
Kateryna D. Makova
Richard M. Myers
Hillary E. Sussman

First Published July 23, 2026

Research

Highly complete long-read genomes reveal pangenomic variation underlying yeast phenotypic diversity

Cory A. Weller
Ilya Andreev
Michael J. Chambers
Morgan Park
Joshua S. Bloom
Meru J. Sadhu Beatrice B. Barnabas Sean Black Gerard G. Bouffard Shelise Y. Brooks Juyun Crawford Holly Marfani Lyudmila Dekhtyar Joel Han Shi-Ling Ho Richelle Legaspi Quino L. Maduro Catherine A. Masiello Jennifer C. McDowell Casandra Montemayor James C. Mullikin Morgan Park Nancy L. Riebow Karen Schandler Brian Schmidt Christina Sison Sirintorn Stantripop
... [+22 authors] ...,
James W. Thomas
Pamela J. Thomas
Meghana Vemulapalli
Alice C. Young

First Published May 1, 2023

In memoriam

C. Thomas Caskey (1938–2022)

Richard A. Gibbs
Aravinda Chakravarti
Evan E. Eichler
Eric D. Green
Richard M. Myers
Anne C. Ferguson-Smith
Kateryna D. Makova
Hillary E. Sussman

First Published February 17, 2022

In memoriam

Deborah A. Nickerson (1954 –2021)

Aravinda Chakravarti
Evan E. Eichler
Richard A. Gibbs
Eric D. Green
Richard M. Myers
Hillary E. Sussman

First Published January 24, 2022

Research

A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

Sumantra Chatterjee
Kameko M. Karasaki
Lauren E. Fries
Ashish Kapoor
Aravinda Chakravarti

First Published November 15, 2021

Method

Sequence-based correction of barcode bias in massively parallel reporter assays

Dongwon Lee
Ashish Kapoor
Changhee Lee
Michael Mudgett
Michael A. Beer
Aravinda Chakravarti

First Published July 20, 2021

Research

Cell-type–specific eQTL of primary melanocytes facilitates identification of melanoma susceptibility genes

Tongwu Zhang
Jiyeon Choi
Michael A. Kovacs
Jianxin Shi
Mai Xu
Alisa M. Goldstein Adam J. Trower D. Timothy Bishop Mark M. Iles David L. Duffy Stuart MacGregor Laufey T. Amundadottir Matthew H. Law Stacie K. Loftus William J. Pavan Kevin M. Brown Matthew H. Law D. Timothy Bishop Jeffrey E. Lee Myriam Brossard Nicholas G. Martin Eric K. Moses Fengju Song Jennifer H. Barrett Rajiv Kumar Douglas F. Easton Paul D.P. Pharoah Anthony J. Swerdlow Katerina P. Kypreou John C. Taylor Mark Harland Juliette Randerson-Moor Lars A. Akslen Per A. Andresen Marie-Françoise Avril Esther Azizi Giovanna Bianchi Scarrà Kevin M. Brown Tadeusz Dȩbniak David L. Duffy David E. Elder Shenying Fang Eitan Friedman Pilar Galan Paola Ghiorzo Elizabeth M. Gillanders Alisa M. Goldstein Nelleke A. Gruis Johan Hansson Per Helsing Marko Hočevar Veronica Höiom Christian Ingvar Peter A. Kanetsky Wei V. Chen Maria Teresa Landi Julie Lang G. Mark Lathrop Jan Lubiński Rona M. Mackie Graham J. Mann Anders Molven Grant W. Montgomery Srdjan Novaković Håkan Olsson Susana Puig Joan Anton Puig-Butille Wenting Wu Abrar A. Qureshi Graham L. Radford-Smith Nienke van der Stoep Remco van Doorn David C. Whiteman Jamie E. Craig Dirk Schadendorf Lisa A. Simms Kathryn P. Burdon Dale R. Nyholt Karen A. Pooley Nick Orr Alexander J. Stratigos Anne E. Cust Sarah V. Ward Nicholas K. Hayward Jiali Han Hans-Joachim Schulze Alison M. Dunning Julia A. Newton Bishop Florence Demenais Christopher I. Amos Stuart MacGregor Mark M. Iles Beatrice B. Barnabas Gerard G. Bouffard Shelis Y. Brooks Holly Coleman Lyudmila Dekhtyar Xiaobin Guan Joel Han Shi-ling Ho Richelle Legaspi Quino L. Maduro Catherine A. Masiello Jennifer C. McDowell Casandra Montemayor James C. Mullikin Morgan Park Nancy L. Riebow Karen Schandler Brian Schmidt Christina Sison Raymond Smith Sirintorn Stantripop
... [+108 authors] ...,
James W. Thomas
Pamela J. Thomas
Meghana Vemulapalli
Alice C. Young

First Published October 17, 2018

Method

Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

Dongwon Lee
Ashish Kapoor
Alexias Safi
Lingyun Song
Marc K. Halushka
Gregory E. Crawford
Aravinda Chakravarti

First Published August 23, 2018

Insight/Outlook

Genomic contributions to Mendelian disease

Aravinda Chakravarti

First Published May 2, 2011

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