Search | Genome Research

Drosophila melanogaster ovary" > Rapid evolution of piRNA clusters in the Drosophila melanogaster ovary

Satyam P. Srivastav
Cédric Feschotte
Andrew G. Clark

First Published May 15, 2024

Trypanosoma congolense populations and experimental infections can be profiled from deep sequence data using universal protein motifs" > Variant antigen repertoires in Trypanosoma congolense populations and experimental infections can be profiled from deep sequence data using universal protein motifs

Sara Silva Pereira
Aitor Casas-Sánchez
Lee R. Haines
Moses Ogugo
Kihara Absolomon
Mandy Sanders Steve Kemp
... [+2 authors] ...,
Álvaro Acosta-Serrano
Harry Noyes
Matthew Berriman
Andrew P. Jackson

First Published July 13, 2018

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals

Ulrike Böhme
Thomas D. Otto
James A. Cotton
Sascha Steinbiss
Mandy Sanders
Samuel O. Oyola Antoine Nicot Sylvain Gandon Kailash P. Patra Colin Herd Ellen Bushell Katarzyna K. Modrzynska Oliver Billker
... [+8 authors] ...,
Joseph M. Vinetz
Ana Rivero
Chris I. Newbold
Matthew Berriman

First Published March 2, 2018

Drosophila" > Evidence for the fixation of gene duplications by positive selection in Drosophila

Margarida Cardoso-Moreira
J. Roman Arguello
Srikanth Gottipati
L.G. Harshman
Jennifer K. Grenier
Andrew G. Clark

First Published April 12, 2016

Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations

Juan L. Rodriguez-Flores
Khalid Fakhro
Francisco Agosto-Perez
Monica D. Ramstetter
Leonardo Arbiza
Thomas L. Vincent Amal Robay Joel A. Malek Karsten Suhre Lotfi Chouchane Ramin Badii Ajayeb Al-Nabet Al-Marri Charbel Abi Khalil Mahmoud Zirie Amin Jayyousi Jacqueline Salit
... [+11 authors] ...,
Alon Keinan
Andrew G. Clark
Ronald G. Crystal
Jason G. Mezey

First Published January 4, 2016

Genomic analysis of the causative agents of coccidiosis in domestic chickens

Adam J. Reid
Damer P. Blake
Hifzur R. Ansari
Karen Billington
Hilary P. Browne
Josephine Bryant Matt Dunn Stacy S. Hung Fumiya Kawahara Diego Miranda-Saavedra Tareq B. Malas Tobias Mourier Hardeep Naghra Mridul Nair Thomas D. Otto Neil D. Rawlings Pierre Rivailler Alejandro Sanchez-Flores Mandy Sanders Chandra Subramaniam Yea-Ling Tay Yong Woo Xikun Wu Bart Barrell Paul H. Dear Christian Doerig Arthur Gruber Alasdair C. Ivens John Parkinson Marie-Adèle Rajandream Martin W. Shirley
... [+26 authors] ...,
Kiew-Lian Wan
Matthew Berriman
Fiona M. Tomley
Arnab Pain

First Published July 11, 2014

Monodelphis domestica" > Chromosome-wide profiling of X-chromosome inactivation and epigenetic states in fetal brain and placenta of the opossum, Monodelphis domestica

Xu Wang
Kory C. Douglas
John L. VandeBerg
Andrew G. Clark
Paul B. Samollow

First Published September 24, 2013

Drosophila genomes" > Efficient identification of Y chromosome sequences in the human and Drosophila genomes

Antonio Bernardo Carvalho
Andrew G. Clark

First Published August 6, 2013

Random X inactivation in the mule and horse placenta

Xu Wang
Donald C. Miller
Andrew G. Clark
Douglas F. Antczak

First Published May 29, 2012

Drosophila simulans clade" > Genome sequencing reveals complex speciation in the Drosophila simulans clade

Daniel Garrigan
Sarah B. Kingan
Anthony J. Geneva
Peter Andolfatto
Andrew G. Clark
Kevin R. Thornton
Daven C. Presgraves

First Published April 13, 2012

Disentangling the relationship between sex-biased gene expression and X-linkage

Richard P. Meisel
John H. Malone
Andrew G. Clark

First Published April 12, 2012

Impact of microRNA regulation on variation in human gene expression

Jian Lu
Andrew G. Clark

First Published March 28, 2012

Leishmania" > Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

Matthew B. Rogers
James D. Hilley
Nicholas J. Dickens
Jon Wilkes
Paul A. Bates
Daniel P. Depledge David Harris Yerim Her Pawel Herzyk Hideo Imamura Thomas D. Otto Mandy Sanders Kathy Seeger Jean-Claude Dujardin
... [+9 authors] ...,
Matthew Berriman
Deborah F. Smith
Christiane Hertz-Fowler
Jeremy C. Mottram

First Published October 28, 2011

Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance" > Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance

Tim Downing
Hideo Imamura
Saskia Decuypere
Taane G. Clark
Graham H. Coombs
James A. Cotton James D. Hilley Simonne de Doncker Ilse Maes Jeremy C. Mottram Mike A. Quail Suman Rijal Mandy Sanders Gabriele Schönian Olivia Stark Shyam Sundar
... [+11 authors] ...,
Manu Vanaerschot
Christiane Hertz-Fowler
Jean-Claude Dujardin
Matthew Berriman

First Published October 28, 2011

Drosophila" > Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in Drosophila

Jian Lu
Andrew G. Clark

First Published November 30, 2009

Darwinian and demographic forces affecting human protein coding genes

Rasmus Nielsen
Melissa J. Hubisz
Ines Hellmann
Dara Torgerson
Aida M. Andrés
Anders Albrechtsen Ryan Gutenkunst Mark D. Adams Michele Cargill
... [+4 authors] ...,
Adam Boyko
Amit Indap
Carlos D. Bustamante
Andrew G. Clark

First Published March 11, 2009

Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways" > Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

Nicholas R. Thomson
Debra J. Clayton
Daniel Windhorst
Georgios Vernikos
Susanne Davidson
Carol Churcher Michael A. Quail Mark Stevens Michael A. Jones Michael Watson Andy Barron Abigail Layton Derek Pickard Robert A. Kingsley Alex Bignell Louise Clark Barbara Harris Doug Ormond Zahra Abdellah Karen Brooks Inna Cherevach Tracey Chillingworth John Woodward Halina Norberczak Angela Lord Claire Arrowsmith Kay Jagels Sharon Moule Karen Mungall Mandy Sanders Sally Whitehead Jose A. Chabalgoity Duncan Maskell Tom Humphrey
... [+29 authors] ...,
Mark Roberts
Paul A. Barrow
Gordon Dougan
Julian Parkhill

First Published June 26, 2008

Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals

Ines Hellmann
Yuan Mang
Zhiping Gu
Peter Li
Francisco M. de la Vega
Andrew G. Clark
Rasmus Nielsen

First Published April 14, 2008

Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes" > Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

Mohammed Sebaihia
Michael W. Peck
Nigel P. Minton
Nicholas R. Thomson
Matthew T.G. Holden
Wilfrid J. Mitchell Andrew T. Carter Stephen D. Bentley David R. Mason Lisa Crossman Catherine J. Paul Alasdair Ivens Marjon H.J. Wells-Bennik Ian J. Davis Ana M. Cerdeño-Tárraga Carol Churcher Michael A. Quail Tracey Chillingworth Theresa Feltwell Audrey Fraser Ian Goodhead Zahra Hance Kay Jagels Natasha Larke Mark Maddison Sharon Moule Karen Mungall Halina Norbertczak Ester Rabbinowitsch Mandy Sanders
... [+25 authors] ...,
Mark Simmonds
Brian White
Sally Whithead
Julian Parkhill

First Published May 22, 2007

Identification by full-coverage array CGH of human DNA copy number increases relative to chimpanzee and gorilla

Gary M. Wilson
Stephane Flibotte
Perseus I. Missirlis
Marco A. Marra
Steven Jones
Kevin Thornton
Andrew G. Clark
Robert A. Holt

First Published December 19, 2005

Determinants of the success of whole-genome association testing

Andrew G. Clark
Eric Boerwinkle
James Hixson
Charles F. Sing

First Published October 26, 2005

Ascertainment bias in studies of human genome-wide polymorphism

Andrew G. Clark
Melissa J. Hubisz
Carlos D. Bustamante
Scott H. Williamson
Rasmus Nielsen

First Published October 26, 2005

Genomic scans for selective sweeps using SNP data

Rasmus Nielsen
Scott Williamson
Yuseob Kim
Melissa J. Hubisz
Andrew G. Clark
Carlos Bustamante

First Published October 26, 2005

Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation" > The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation

Nicholas R. Thomson
Corin Yeats
Kenneth Bell
Matthew T.G. Holden
Stephen D. Bentley
Morag Livingstone Ana M. Cerdeño-Tárraga Barbara Harris Jon Doggett Doug Ormond Karen Mungall Kay Clarke Theresa Feltwell Zahra Hance Mandy Sanders Michael A. Quail
... [+11 authors] ...,
Claire Price
Bart G. Barrell
Julian Parkhill
David Longbottom

First Published April 18, 2005

The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern

Francisco M. De La Vega
Hadar Isaac
Andrew Collins
Charles R. Scafe
Bjarni V. Halldórsson
Xiaoping Su Ross A. Lippert Yu Wang Marion Laig-Webster Ryan T. Koehler Janet S. Ziegle Lewis T. Wogan Junko F. Stevens Kyle M. Leinen Sheri J. Olson Karl J. Guegler Xiaoqing You Lily H. Xu Heinz G. Hemken Francis Kalush Mitsuo Itakura Yi Zheng Guy de Thé Stephen J. O'Brien Andrew G. Clark
... [+20 authors] ...,
Sorin Istrail
Michael W. Hunkapiller
Eugene G. Spier
Dennis A. Gilbert

First Published March 21, 2005

Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution" > Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution

Stephen Richards
Yue Liu
Brian R. Bettencourt
Pavel Hradecky
Stan Letovsky
Rasmus Nielsen Kevin Thornton Melissa J. Hubisz Rui Chen Richard P. Meisel Olivier Couronne Sujun Hua Mark A. Smith Peili Zhang Jing Liu Harmen J. Bussemaker Marinus F. van Batenburg Sally L. Howells Steven E. Scherer Erica Sodergren Beverly B. Matthews Madeline A. Crosby Andrew J. Schroeder Daniel Ortiz-Barrientos Catharine M. Rives Michael L. Metzker Donna M. Muzny Graham Scott David Steffen David A. Wheeler Kim C. Worley Paul Havlak K. James Durbin Amy Egan Rachel Gill Jennifer Hume Margaret B. Morgan George Miner Cerissa Hamilton Yanmei Huang Lenée Waldron Daniel Verduzco Kerstin P. Clerc-Blankenburg Inna Dubchak Mohamed A.F. Noor Wyatt Anderson Kevin P. White Andrew G. Clark
... [+43 authors] ...,
Stephen W. Schaeffer
William Gelbart
George M. Weinstock
Richard A. Gibbs

First Published January 3, 2005

Optimal Haplotype Block-Free Selection of Tagging SNPs for Genome-Wide Association Studies

Bjarni V. Halldórsson
Vineet Bafna
Ross Lippert
Russell Schwartz
Francisco M. De La Vega
Andrew G. Clark
Sorin Istrail

First Published August 2, 2004

The Search for Meaning in Noncoding DNA

Andrew G. Clark

First Published August 1, 2001

Sequence Diversity and Large-Scale Typing of SNPs in the Human Apolipoprotein E Gene

Deborah A. Nickerson
Scott L. Taylor
Stephanie M. Fullerton
Kenneth M. Weiss
Andrew G. Clark
Jari H. Stengård
Veikko Salomaa
Eric Boerwinkle
Charles F. Sing

First Published October 1, 2000

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Your search for returned 29 results

Drosophila melanogaster ovary" > Rapid evolution of piRNA clusters in the Drosophila melanogaster ovary

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals

Drosophila" > Evidence for the fixation of gene duplications by positive selection in Drosophila

Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations

Genomic analysis of the causative agents of coccidiosis in domestic chickens

Monodelphis domestica" > Chromosome-wide profiling of X-chromosome inactivation and epigenetic states in fetal brain and placenta of the opossum, Monodelphis domestica

Drosophila genomes" > Efficient identification of Y chromosome sequences in the human and Drosophila genomes

Random X inactivation in the mule and horse placenta

Drosophila simulans clade" > Genome sequencing reveals complex speciation in the Drosophila simulans clade

Disentangling the relationship between sex-biased gene expression and X-linkage

Impact of microRNA regulation on variation in human gene expression

Leishmania" > Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance" > Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance

Drosophila" > Population dynamics of PIWI-interacting RNAs (piRNAs) and their targets in Drosophila

Darwinian and demographic forces affecting human protein coding genes

Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways" > Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals

Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes" > Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

Identification by full-coverage array CGH of human DNA copy number increases relative to chimpanzee and gorilla

Determinants of the success of whole-genome association testing

Ascertainment bias in studies of human genome-wide polymorphism

Genomic scans for selective sweeps using SNP data

Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation" > The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation

The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern

Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution" > Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution

Optimal Haplotype Block-Free Selection of Tagging SNPs for Genome-Wide Association Studies

The Search for Meaning in Noncoding DNA

Sequence Diversity and Large-Scale Typing of SNPs in the Human Apolipoprotein E Gene

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Your search for returned 29 results