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Research

Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources

  • First Published May 14, 2026
Method

Highly accurate assembly polishing with DeepPolisher

  • First Published May 19, 2025
Research

Closing the gaps, and improving somatic structural variant analysis and benchmarking using CHM13-T2T

  • First Published March 17, 2025
Research

Assessing DNA methylation detection for primary human tissue using Nanopore sequencing

  • First Published March 7, 2025
Research

Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation

  • First Published December 5, 2024
Method

Phased nanopore assembly with Shasta and modular graph phasing with GFAse

  • First Published April 16, 2024
Method

Fast and accurate out-of-core PCA framework for large scale biobank data

  • First Published August 24, 2023
Research

Gaps and complex structurally variant loci in phased genome assemblies

  • First Published May 10, 2023
Method

Haplotype and population structure inference using neural networks in whole-genome sequencing data

  • First Published July 6, 2022
Method

A complete pedigree-based graph workflow for rare candidate variant analysis

  • First Published April 28, 2022
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