Search | Genome Research

CL_Clone_GR_LBSite

Your search for returned 10 results

Single-cell spatial transcriptomics reveals a dystrophic trajectory following a developmental bifurcation of myoblast cell fates in facioscapulohumeral muscular dystrophy

Lujia Chen
Xiangduo Kong
Kevin G. Johnston
Ali Mortazavi
Todd C. Holmes
Zhiqun Tan
Kyoko Yokomori
Xiangmin Xu

First Published May 22, 2024

Integration of high-resolution promoter profiling assays reveals novel, cell type–specific transcription start sites across 115 human cell and tissue types

Jill E. Moore
Xiao-Ou Zhang
Shaimae I. Elhajjajy
Kaili Fan
Henry E. Pratt
Fairlie Reese
Ali Mortazavi
Zhiping Weng

First Published December 23, 2021

Dynamics of microRNA expression during mouse prenatal development

Sorena Rahmanian
Rabi Murad
Alessandra Breschi
Weihua Zeng
Mark Mackiewicz
Brian Williams Carrie A. Davis Brian Roberts Sarah Meadows Dianna Moore Diane Trout Chris Zaleski Alex Dobin Lei-Hoon Sei Jorg Drenkow Alex Scavelli Thomas R. Gingeras
... [+12 authors] ...,
Barbara J. Wold
Richard M. Myers
Roderic Guigó
Ali Mortazavi

First Published October 23, 2019

Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification

Manuel Tardaguila
Lorena de la Fuente
Cristina Marti
Cécile Pereira
Francisco Jose Pardo-Palacios
Hector del Risco Marc Ferrell Maravillas Mellado Marissa Macchietto Kenneth Verheggen Mariola Edelmann Iakes Ezkurdia Jesus Vazquez Michael Tress Ali Mortazavi
... [+10 authors] ...,
Lennart Martens
Susana Rodriguez-Navarro
Victoria Moreno-Manzano
Ana Conesa

First Published July 2, 2018

SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification

Manuel Tardaguila
Lorena de la Fuente
Cristina Marti
Cécile Pereira
Francisco Jose Pardo-Palacios
Hector del Risco Marc Ferrell Maravillas Mellado Marissa Macchietto Kenneth Verheggen Mariola Edelmann Iakes Ezkurdia Jesus Vazquez Michael Tress Ali Mortazavi
... [+10 authors] ...,
Lennart Martens
Susana Rodriguez-Navarro
Victoria Moreno-Manzano
Ana Conesa

First Published February 9, 2018

Integrating and mining the chromatin landscape of cell-type specificity using self-organizing maps

Ali Mortazavi
Shirley Pepke
Camden Jansen
Georgi K. Marinov
Jason Ernst
Manolis Kellis
Ross C. Hardison
Richard M. Myers
Barbara J. Wold

First Published October 29, 2013

RNA editing in the human ENCODE RNA-seq data

Eddie Park
Brian Williams
Barbara J. Wold
Ali Mortazavi

First Published September 5, 2012

Effects of sequence variation on differential allelic transcription factor occupancy and gene expression

Timothy E. Reddy
Jason Gertz
Florencia Pauli
Katerina S. Kucera
Katherine E. Varley
Kimberly M. Newberry Georgi K. Marinov Ali Mortazavi Brian A. Williams Lingyun Song
... [+5 authors] ...,
Gregory E. Crawford
Barbara Wold
Huntington F. Willard
Richard M. Myers

First Published February 2, 2012

Caenorhabditis nematode genome with RNA-seq" > Scaffolding a Caenorhabditis nematode genome with RNA-seq

Ali Mortazavi
Erich M. Schwarz
Brian Williams
Lorian Schaeffer
Igor Antoshechkin
Barbara J. Wold
Paul W. Sternberg

First Published October 27, 2010

Comparative genomics modeling of the NRSF/REST repressor network: From single conserved sites to genome-wide repertoire

Ali Mortazavi
Evonne Chen Leeper Thompson
Sarah T. Garcia
Richard M. Myers
Barbara Wold

First Published September 8, 2006