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Integrated single-cell multiome analysis reveals muscle fiber-type gene regulatory circuitry modulated by endurance exercise

  • Aliza B. Rubenstein
  • Gregory R. Smith
  • Zidong Zhang
  • Xi Chen
  • Toby L. Chambers
  • Frederique Ruf-Zamojski Natalia Mendelev Wan Sze Cheng Michel Zamojski Mary Anne S. Amper Venugopalan D. Nair Andrew R. Marderstein Stephen B. Montgomery Olga G. Troyanskaya
  • ... [+9 authors] ...,
  • Elena Zaslavsky
  • Todd Trappe
  • Scott Trappe
  • Stuart C. Sealfon
  • First Published May 20, 2025
Resource

A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes

  • Ran Li
  • Mian Gong
  • Xinmiao Zhang
  • Fei Wang
  • Zhenyu Liu
  • Lei Zhang Qimeng Yang Yuan Xu Mengsi Xu Huanhuan Zhang Yunfeng Zhang Xuelei Dai Yuanpeng Gao Zhuangbiao Zhang Wenwen Fang Yuta Yang Weiwei Fu Chunna Cao Peng Yang Zeinab Amiri Ghanatsaman Niloufar Jafarpour Negari Hojjat Asadollahpour Nanaei Xiangpeng Yue Yuxuan Song Xianyong Lan Weidong Deng Xihong Wang Chuanying Pan Ruidong Xiang Eveline M. Ibeagha-Awemu Pat (J.S.) Heslop-Harrison
  • ... [+26 authors] ...,
  • Benjamin D. Rosen
  • Johannes A. Lenstra
  • Shangquan Gan
  • Yu Jiang
  • First Published April 3, 2023
Resource

Modeling transcriptional regulation of model species with deep learning

  • Evan M. Cofer
  • João Raimundo
  • Alicja Tadych
  • Yuji Yamazaki
  • Aaron K. Wong
  • Chandra L. Theesfeld
  • Michael S. Levine
  • Olga G. Troyanskaya
  • First Published April 22, 2021
Resource

Modeling molecular development of breast cancer in canine mammary tumors

  • Kiley Graim
  • Dmitriy Gorenshteyn
  • David G. Robinson
  • Nicholas J. Carriero
  • James A. Cahill
  • Rumela Chakrabarti Michael H. Goldschmidt Amy C. Durham Julien Funk John D. Storey
  • ... [+5 authors] ...,
  • Vessela N. Kristensen
  • Chandra L. Theesfeld
  • Karin U. Sorenmo
  • Olga G. Troyanskaya
  • First Published December 23, 2020
Resource

Exploring the human genome with functional maps

  • Curtis Huttenhower
  • Erin M. Haley
  • Matthew A. Hibbs
  • Vanessa Dumeaux
  • Daniel R. Barrett
  • Hilary A. Coller
  • Olga G. Troyanskaya
  • First Published February 26, 2009
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