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Research

Whole-genome variant detection in long-read sequencing data from ultra-low input patient samples

Katherine Wang
Cera J Aex
Hayan Lee
Lucas Finot
Kevin Zhu
Julianna R Chang Aaron Marks Horning William J Rowell
... [+3 authors] ...,
Philip Li
Sarah Kingan
Michael P Snyder
Graham Scott Erwin

First Published May 28, 2026

Research

Centromeric instability and chromoanasynthesis observed in nine supernumerary marker chromosomes resolved with long-read genome sequencing

Kristine Bilgrav Saether
Angelo Salazar Mantero
Marlene Ek
Maria Pettersson
Elisabeth Syk Lundberg
Christopher M. Grochowski
Claudia M.B. Carvalho
Jesper Eisfeldt
Anna Lindstrand

First Published March 25, 2026

Research

ACTB methylation regulates SMARCA4 genomic occupancy to promote translation and reduce adhesion in colorectal cancer cells

Elina Abaev-Schneiderman
Linh Nguyen
Raz Shalev
Tzofit Elbaz Biton
Anand Chopra
Giritharan Jagadeesan Daniel Sevilla-Sanchez Nili Tickotsky Moskovitz
... [+3 authors] ...,
Liron Levin
Michal Feldman
Capucine Van Rechem
Dan Levy

First Published March 25, 2026

Research

Aphelenchus avenae implicates P5CS in nematode desiccation stress response" > Haplotype-resolved telomere-to-telomere genome of Aphelenchus avenae implicates P5CS in nematode desiccation stress response

Yali Zhang
Yayi Zhou
Yangyang Chen
Xueyu Wang
Boyan Hu
Shahid Siddique Romnick A. Latina Veronica I. Casey Dexin Bo Yucheng Liao
... [+5 authors] ...,
Min Zhang
Ming Sun
Fengjuan Zhang
Dadong Dai

First Published March 23, 2026

Research

Confounding factors in assessing the enriched expression of somatic mutant alleles in bulk tumor samples

Kohei Hagiwara
Andrew Thrasher
Nadezhda V. Terekhanova
Jinghui Zhang

First Published March 4, 2026

Research

cis-regulatory modules acting during vertebrate organogenesis" > Functional genomics analysis of developing zebrafish and human endoderm reveals highly conserved cis-regulatory modules acting during vertebrate organogenesis

Daniela M. Riley
Randa Elsayed
Mark D. Walsh
Simaran Johal
Ying Lin
Harry Walton
Till Bretschneider
Sascha Ott
Andrew C. Nelson

First Published March 4, 2026

Research

Dynamic A-to-I RNA editing in response to gut microbiome in honey bees

Yuange Duan
Min Huang
Lin Ye
Ling Ma
Yashuai Wu
Yating Du Jiyao Liu Fan Song Li Tian
... [+4 authors] ...,
Wanzhi Cai
Hu Li
Xin Zhou
Shiqi Luo

First Published March 4, 2026

Research

Heterogeneous and novel transcript expression in single cells of patient-derived clear cell renal cell carcinoma organoids

Tülay Karakulak
Natalia Zajac
Hella Anna Bolck
Anna Bratus-Neuenschwander
Qin Zhang
Weihong Qi Debleena Basu Tamara Carrasco Oltra
... [+3 authors] ...,
Hubert Rehrauer
Christian von Mering
Holger Moch
Abdullah Kahraman

First Published March 19, 2025

Research

Plasma cell-free RNA characteristics in COVID-19 patients

Yanqun Wang
Jie Li
Lu Zhang
Hai-Xi Sun
Zhaoyong Zhang
Jinjin Xu Yonghao Xu Yu Lin Airu Zhu Yuxue Luo Haibo Zhou Yan Wu Shanwen Lin Yuzhe Sun Fei Xiao Ruiying Chen Liyan Wen Wei Chen Fang Li Rijing Ou Yanjun Zhang Tingyou Kuo Yuming Li Lingguo Li Jing Sun Kun Sun Zhen Zhuang Haorong Lu Zhao Chen Guoqiang Mai Jianfen Zhuo Puyi Qian Jiayu Chen Huanming Yang Jian Wang Xun Xu Nanshan Zhong
... [+32 authors] ...,
Jingxian Zhao
Junhua Li
Jincun Zhao
Xin Jin

First Published January 21, 2022

Research

Pan-cancer analysis distinguishes transcriptional changes of aneuploidy from proliferation

Christopher Buccitelli
Lorena Salgueiro
Konstantina Rowald
Rocio Sotillo
Balca R. Mardin
Jan O. Korbel

First Published March 20, 2017