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Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps

  • Haibao Tang
  • Xiyin Wang
  • John E. Bowers
  • Ray Ming
  • Maqsudul Alam
  • Andrew H. Paterson
  • First Published October 2, 2008

28-Way vertebrate alignment and conservation track in the UCSC Genome Browser

  • Webb Miller
  • Kate Rosenbloom
  • Ross C. Hardison
  • Minmei Hou
  • James Taylor
  • Brian Raney Richard Burhans David C. King Robert Baertsch Daniel Blankenberg Sergei L. Kosakovsky Pond Anton Nekrutenko Belinda Giardine Robert S. Harris Svitlana Tyekucheva Mark Diekhans Thomas H. Pringle William J. Murphy Arthur Lesk George M. Weinstock Kerstin Lindblad-Toh Richard A. Gibbs
  • ... [+17 authors] ...,
  • Eric S. Lander
  • Adam Siepel
  • David Haussler
  • W. James Kent
  • First Published November 5, 2007

Reconstructing contiguous regions of an ancestral genome

  • Jian Ma
  • Louxin Zhang
  • Bernard B. Suh
  • Brian J. Raney
  • Richard C. Burhans
  • W. James Kent
  • Mathieu Blanchette
  • David Haussler
  • Webb Miller
  • First Published September 18, 2006

A global assembly of cotton ESTs

  • Joshua A. Udall
  • Jordan M. Swanson
  • Karl Haller
  • Ryan A. Rapp
  • Michael E. Sparks
  • Jamie Hatfield Yeisoo Yu Yingru Wu Caitriona Dowd Aladdin B. Arpat Brad A. Sickler Thea A. Wilkins Jin Ying Guo Xiao Ya Chen Jodi Scheffler Earl Taliercio Ricky Turley Helen McFadden Paxton Payton Natalya Klueva Randell Allen Deshui Zhang Candace Haigler Curtis Wilkerson Jinfeng Suo Stefan R. Schulze Margaret L. Pierce Margaret Essenberg HyeRan Kim Danny J. Llewellyn Elizabeth S. Dennis David Kudrna
  • ... [+27 authors] ...,
  • Rod Wing
  • Andrew H. Paterson
  • Cari Soderlund
  • Jonathan F. Wendel
  • First Published February 14, 2006

Grains of knowledge: Genomics of model cereals

  • Andrew H. Paterson
  • Michael Freeling
  • Takuji Sasaki
  • First Published December 8, 2005

Galaxy: A platform for interactive large-scale genome analysis

  • Belinda Giardine
  • Cathy Riemer
  • Ross C. Hardison
  • Richard Burhans
  • Laura Elnitski
  • Prachi Shah Yi Zhang Daniel Blankenberg Istvan Albert
  • ... [+4 authors] ...,
  • James Taylor
  • Webb Miller
  • W. James Kent
  • Anton Nekrutenko
  • First Published September 16, 2005

Indica and Japonica Genome Alignments" > An SNP Resource for Rice Genetics and Breeding Based on Subspecies Indica and Japonica Genome Alignments

  • F. Alex Feltus
  • Jun Wan
  • Stefan R. Schulze
  • James C. Estill
  • Ning Jiang
  • Andrew H. Paterson
  • First Published September 1, 2004

Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner

  • Mathieu Blanchette
  • W. James Kent
  • Cathy Riemer
  • Laura Elnitski
  • Arian F.A. Smit
  • Krishna M. Roskin Robert Baertsch Kate Rosenbloom
  • ... [+3 authors] ...,
  • Hiram Clawson
  • Eric D. Green
  • David Haussler
  • Webb Miller
  • First Published April 1, 2004
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