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Method

Three assays for in-solution enrichment of ancient human DNA at more than a million SNPs

  • Nadin Rohland
  • Swapan Mallick
  • Matthew Mah
  • Robert Maier
  • Nick Patterson
  • David Reich
  • First Published December 14, 2022
Method

A minimally destructive protocol for DNA extraction from ancient teeth

  • Éadaoin Harney
  • Olivia Cheronet
  • Daniel M. Fernandes
  • Kendra Sirak
  • Matthew Mah
  • Rebecca Bernardos Nicole Adamski Nasreen Broomandkhoshbacht Kimberly Callan Ann Marie Lawson Jonas Oppenheimer Kristin Stewardson Fatma Zalzala Alexandra Anders Francesca Candilio Mihai Constantinescu Alfredo Coppa Ion Ciobanu János Dani Zsolt Gallina Francesco Genchi Emese Gyöngyvér Nagy Tamás Hajdu Magdolna Hellebrandt Antónia Horváth Ágnes Király Krisztián Kiss Barbara Kolozsi Péter Kovács Kitti Köhler Michaela Lucci Ildikó Pap Sergiu Popovici Pál Raczky Angela Simalcsik Tamás Szeniczey Sergey Vasilyev
  • ... [+32 authors] ...,
  • Cristian Virag
  • Nadin Rohland
  • David Reich
  • Ron Pinhasi
  • First Published February 12, 2021
Method

Human auditory ossicles as an alternative optimal source of ancient DNA

  • Kendra Sirak
  • Daniel Fernandes
  • Olivia Cheronet
  • Eadaoin Harney
  • Matthew Mah
  • Swapan Mallick Nadin Rohland Nicole Adamski Nasreen Broomandkhoshbacht Kimberly Callan Francesca Candilio Ann Marie Lawson Kirsten Mandl Jonas Oppenheimer Kristin Stewardson Fatma Zalzala Alexandra Anders Juraj Bartík Alfredo Coppa Tumen Dashtseveg Sándor Évinger Zdeněk Farkaš Tamás Hajdu Jamsranjav Bayarsaikhan Lauren McIntyre Vyacheslav Moiseyev Mercedes Okumura Ildikó Pap Michael Pietrusewsky Pál Raczky Alena Šefčáková Andrei Soficaru Tamás Szeniczey Béla Miklós Szőke Dennis Van Gerven
  • ... [+30 authors] ...,
  • Sergey Vasilyev
  • Lynne Bell
  • David Reich
  • Ron Pinhasi
  • First Published February 25, 2020
Method

An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics

  • Ulrich Omasits
  • Adithi R. Varadarajan
  • Michael Schmid
  • Sandra Goetze
  • Damianos Melidis
  • Marc Bourqui Olga Nikolayeva Maxime Québatte Andrea Patrignani Christoph Dehio
  • ... [+5 authors] ...,
  • Juerg E. Frey
  • Mark D. Robinson
  • Bernd Wollscheid
  • Christian H. Ahrens
  • First Published November 15, 2017
Method

Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

  • Ulrich Omasits
  • Maxime Quebatte
  • Daniel J. Stekhoven
  • Claudia Fortes
  • Bernd Roschitzki
  • Mark D. Robinson
  • Christoph Dehio
  • Christian H. Ahrens
  • First Published July 22, 2013
Method

Copy-number-aware differential analysis of quantitative DNA sequencing data

  • Mark D. Robinson
  • Dario Strbenac
  • Clare Stirzaker
  • Aaron L. Statham
  • Jenny Song
  • Terence P. Speed
  • Susan J. Clark
  • First Published August 9, 2012
Method

Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA

  • Aaron L. Statham
  • Mark D. Robinson
  • Jenny Z. Song
  • Marcel W. Coolen
  • Clare Stirzaker
  • Susan J. Clark
  • First Published March 30, 2012
Method

Evaluation of affinity-based genome-wide DNA methylation data: Effects of CpG density, amplification bias, and copy number variation

  • Mark D. Robinson
  • Clare Stirzaker
  • Aaron L. Statham
  • Marcel W. Coolen
  • Jenny Z. Song
  • Shalima S. Nair
  • Dario Strbenac
  • Terence P. Speed
  • Susan J. Clark
  • First Published November 2, 2010
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