METHODS
cis-Regulatory Motifs Using Functional Networks" > Discovering Novel cis-Regulatory Motifs Using Functional Networks
- First Published May 1, 2003
METHODS
DASH-2: Flexible, Low-Cost, and High-Throughput SNP Genotyping by Dynamic Allele-Specific Hybridization on Membrane Arrays
- First Published May 1, 2003
METHODS
Unbiased Whole-Genome Amplification Directly From Clinical Samples
- First Published April 14, 2003
METHODS
7-Based Genome-Wide Random Insertional Mutagenesis of Candida glabrata " > Tn7-Based Genome-Wide Random Insertional Mutagenesis of Candida glabrata
- First Published April 14, 2003
METHODS
Predicting Gene Ontology Biological Process From Temporal Gene Expression Patterns
- First Published April 14, 2003
METHODS
LineUp: Statistical Detection of Chromosomal Homology With Application to Plant Comparative Genomics
- First Published April 14, 2003
METHODS
Ran's C-terminal, Basic Patch, and Nucleotide Exchange Mechanisms in Light of a Canonical Structure for Rab, Rho, Ras, and Ran GTPases
- First Published April 1, 2003
METHODS
Spectral Biclustering of Microarray Data: Coclustering Genes and Conditions
- First Published April 1, 2003
METHODS
Novel Multilocus Measure of Linkage Disequilibrium to Estimate Past Effective Population Size
- First Published March 12, 2003
METHODS
The Gene Ontology Annotation (GOA) Project: Implementation of GO in SWISS-PROT, TrEMBL, and InterPro
- First Published March 12, 2003
METHODS
LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA
- First Published March 12, 2003
METHODS
Computationally Identifying Novel NF-κB-Regulated Immune Genes in the Human Genome
- First Published March 12, 2003
METHODS
Screening of Gene-Associated Polymorphisms by Use of In-Gel Competitive Reassociation and EST (cDNA) Array Hybridization
- First Published March 1, 2003
METHODS
A Classification-Based Machine Learning Approach for the Analysis of Genome-Wide Expression Data
- First Published March 1, 2003
METHODS
A Highly Efficient Recombineering-Based Method for Generating Conditional Knockout Mutations
- First Published March 1, 2003
METHODS
Large-Scale Identification of Single-Feature Polymorphisms in Complex Genomes
- First Published February 12, 2003
METHODS
SLAM: Cross-Species Gene Finding and Alignment with a Generalized Pair Hidden Markov Model
- First Published February 12, 2003
METHODS
A Complexity Reduction Algorithm for Analysis and Annotation of Large Genomic Sequences
- First Published February 1, 2003
METHODS
Polymorphism Ratio Sequencing: A New Approach for Single Nucleotide Polymorphism Discovery and Genotyping
- First Published February 1, 2003
METHODS
Whole Genome Analysis of Genetic Alterations in Small DNA Samples Using Hyperbranched Strand Displacement Amplification and Array–CGH
- First Published February 1, 2003
METHODS
Identification and Functional Analysis of Human Transcriptional Promoters
- First Published February 1, 2003
METHODS
Whole-Genome Sequence Assembly for Mammalian Genomes: Arachne 2
- First Published January 1, 2003
METHODS
Multiple Cross and Inbred Strain Haplotype Mapping of Complex-Trait Candidate Genes
- First Published January 1, 2003
METHODS
Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays
- First Published December 1, 2002
METHODS
Generalized Gap Model for Bacterial Artificial Chromosome Clone Fingerprint Mapping and Shotgun Sequencing
- First Published December 1, 2002
METHODS
A Strategy to Retrieve the Whole Set of Protein Modules in Microbial Proteomes
- First Published December 1, 2002
METHODS
A Novel Method for SNP Detection Using a New Duplex-Specific Nuclease From Crab Hepatopancreas
- First Published December 1, 2002
METHODS
Extension and Integration of the Gene Ontology (GO): Combining GO Vocabularies With External Vocabularies
- First Published December 1, 2002
METHODS
Highly Efficient Modification of Bacterial Artificial Chromosomes (BACs) Using Novel Shuttle Vectors Containing the R6Kγ Origin of Replication
- First Published December 1, 2002
METHODS
A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments: A Case Study from Alfalfa
- First Published December 1, 2002
METHODS
Detection of Peptides, Proteins, and Drugs That Selectively Interact With Protein Targets
- First Published November 1, 2002
METHODS
Arabidopsis and Rice" > The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and Rice
- First Published November 1, 2002
METHODS
Gene Expression Analysis Using Oligonucleotide Arrays Produced by Maskless Photolithography
- First Published November 1, 2002
METHODS
Genomic Signature Tags (GSTs): A System for Profiling Genomic DNA
- First Published November 1, 2002
METHODS
SNPSTRs: Empirically Derived, Rapidly Typed, Autosomal Haplotypes for Inference of Population History and Mutational Processes
- First Published November 1, 2002
METHODS
Protein–Protein Interactions Between Large Proteins: Two-Hybrid Screening Using a Functionally Classified Library Composed of Long cDNAs
- First Published October 15, 2002
METHODS
Using Text Analysis to Identify Functionally Coherent Gene Groups
- First Published October 1, 2002
METHODS
Judging the Quality of Gene Expression-Based Clustering Methods Using Gene Annotation
- First Published October 1, 2002
METHODS
iFRET: An Improved Fluorescence System for DNA-Melting Analysis
- First Published September 1, 2002
METHODS
GAZE: A Generic Framework for the Integration of Gene-Prediction Data by Dynamic Programming
- First Published September 1, 2002
METHODS
Mutation Detection Using Mass Spectrometric Separation of Tiny Oligonucleotide Fragments
- First Published August 22, 2002
METHODS
Parallel Construction of Orthologous Sequence-Ready Clone Contig Maps in Multiple Species
- First Published August 1, 2002
METHODS
Automated De Novo Identification of Repeat Sequence Families in Sequenced Genomes
- First Published July 19, 2002
METHODS
Validation of DNA Sequences Using Mass Spectrometry Coupled with Nucleoside Mass Tagging
- First Published July 1, 2002
METHODS
Interactive Exploration of Microarray Gene Expression Patterns in a Reduced Dimensional Space
- First Published July 1, 2002
METHODS
Caenorhabditis elegans " > High-Throughput Gene Mapping in Caenorhabditis elegans
- First Published July 1, 2002
METHODS
A Computer-Based Method of Selecting Clones for a Full-Length cDNA Project: Simultaneous Collection of Negligibly Redundant and Variant cDNAs
- First Published June 18, 2002
METHODS
Single Nucleotide Polymorphism Mapping Using Genome-Wide Unique Sequences
- First Published June 18, 2002
METHODS
A Highly Reproducible, Linear, and Automated Sample Preparation Method for DNA Microarrays
- First Published June 1, 2002
METHODS
Predicting Gene Ontology Functions from ProDom and CDD Protein Domains
- First Published April 1, 2002
METHODS
Consensus Promoter Identification in the Human Genome Utilizing Expressed Gene Markers and Gene Modeling
- First Published March 1, 2002
METHODS
Computational Detection and Location of Transcription Start Sites in Mammalian Genomic DNA
- First Published March 1, 2002
METHODS
Drosophila Early Developmental Enhancers" > Extraction of Functional Binding Sites from Unique Regulatory Regions: The Drosophila Early Developmental Enhancers
- First Published February 15, 2002
METHODS
Novel Fluorescence Labeling and High-Throughput Assay Technologies for In Vitro Analysis of Protein Interactions
- First Published February 15, 2002
METHODS
Oligonucleotide Arrays for High-Throughput SNPs Detection in the MHC Class I Genes: HLA-B as a Model System
- First Published February 15, 2002
METHODS
High-Density Cell Microarrays for Parallel Functional Determinations
- First Published February 15, 2002
METHODS
Linker-Mediated Recombinational Subcloning of Large DNA Fragments Using Yeast
- First Published January 1, 2002
METHODS
Finding Genes in the C2C12 Osteogenic Pathway by k-Nearest-Neighbor Classification of Expression Data
- First Published January 1, 2002
METHODS
Associating Genes with Gene Ontology Codes Using a Maximum Entropy Analysis of Biomedical Literature
- First Published January 1, 2002
METHODS
Methylation-Specific Oligonucleotide Microarray: A New Potential for High-Throughput Methylation Analysis
- First Published December 14, 2001
METHODS
Enzymatic Regional Methylation Assay: A Novel Method to Quantify Regional CpG Methylation Density
- First Published December 14, 2001
METHODS
Identification of Potential Interaction Networks Using Sequence-Based Searches for Conserved Protein-Protein Interactions or “Interologs”
- First Published December 1, 2001
METHODS
Trimming, Weighting, and Grouping SNPs in Human Case-Control Association Studies
- First Published December 1, 2001
METHODS
A Streamlined Process to Phenotypically Profile Heterologous cDNAs in Parallel Using Yeast Cell-Based Assays
- First Published November 1, 2001
METHODS
Genomewide Trapping of Genes that Encode Secreted and Transmembrane Proteins Repressed by Oncogenic Signaling
- First Published November 1, 2001
METHODS
Automated Construction of High-Density Comparative Maps Between Rat, Human, and Mouse
- First Published November 1, 2001
METHODS
High-Throughput Variation Detection and Genotyping Using Microarrays
- First Published October 15, 2001
METHODS
SNP Genotyping by Multiplexed Solid-Phase Amplification and Fluorescent Minisequencing
- First Published October 15, 2001
METHODS
Bayesian Analysis of Haplotypes for Linkage Disequilibrium Mapping
- First Published October 1, 2001
METHODS
High-Resolution BAC-Based Map of the Central Portion of Mouse Chromosome 5
- First Published October 1, 2001