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LETTER

Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution

Deyou Zheng
Adam Frankish
Robert Baertsch
Philipp Kapranov
Alexandre Reymond
Siew Woh Choo Yontao Lu France Denoeud Stylianos E. Antonarakis Michael Snyder Yijun Ruan Chia-Lin Wei
... [+7 authors] ...,
Thomas R. Gingeras
Roderic Guigó
Jennifer Harrow
Mark B. Gerstein

First Published June 13, 2007

LETTER

Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing

Terrence S. Furey
Mark Diekhans
Yontao Lu
Tina A. Graves
Lachlan Oddy
Jennifer Randall-Maher
LaDeana W. Hillier
Richard K. Wilson
David Haussler

First Published October 15, 2004

LETTER

Continued Discovery of Transcriptional Units Expressed in Cells of the Mouse Mononuclear Phagocyte Lineage

Christine A. Wells
Timothy Ravasi
Razvan Sultana
Ken Yagi
Piero Carninci
Hidemasa Bono Geoffrey Faulkner
... [+2 authors] ...,
Yasushi Okazaki
John Quackenbush
David A. Hume
Paul A. Lyons

First Published June 2, 2003

LETTER

The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment

Sean M. Grimmond
Kevin C. Miranda
Zheng Yuan
Melissa J. Davis
David A. Hume
Ken Yagi Naoko Tominaga
... [+2 authors] ...,
Hidemasa Bono
Yoshihide Hayashizaki
Yasushi Okazaki
Rohan D. Teasdale

First Published June 2, 2003

LETTER

Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System

Stefano Gustincich
Serge Batalov
Kirk W. Beisel
Hidemasa Bono
Piero Carninci
Colin F. Fletcher Sean Grimmond Nobutaka Hirokawa Erich D. Jarvis Tim Jegla Yuka Kawasawa Julianna LeMieux Harukata Miki Elio Raviola Rohan D. Teasdale Naoko Tominaga
... [+11 authors] ...,
Ken Yagi
Andreas Zimmer
Yoshihide Hayashizaki
Yasushi Okazaki

First Published June 2, 2003

LETTER

Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling

Itoshi Nikaido
Chika Saito
Yosuke Mizuno
Makiko Meguro
Hidemasa Bono
Moritoshi Kadomura Tomohiro Kono Gerard A. Morris
... [+3 authors] ...,
Paul A. Lyons
Mitsuo Oshimura
Yoshihide Hayashizaki
Yasushi Okazaki

First Published June 2, 2003

LETTER

CDS Annotation in Full-Length cDNA Sequence

Masaaki Furuno
Takeya Kasukawa
Rintaro Saito
Jun Adachi
Harukazu Suzuki
Richard Baldarelli
Yoshihide Hayashizaki
Yasushi Okazaki

First Published June 2, 2003

LETTER

Systematic Expression Profiling of the Mouse Transcriptome Using RIKEN cDNA Microarrays

Hidemasa Bono
Ken Yagi
Takeya Kasukawa
Itoshi Nikaido
Naoko Tominaga
Rika Miki Yosuke Mizuno Yasuhiro Tomaru Hitoshi Goto Hiroyuki Nitanda Daisuke Shimizu Hirochika Makino Tomoyuki Morita Junshin Fujiyama Takehito Sakai
... [+10 authors] ...,
Takashi Shimoji
David A. Hume
Yoshihide Hayashizaki
Yasushi Okazaki

First Published June 2, 2003

LETTER

Comprehensive Analysis of the Mouse Metabolome Based on the Transcriptome

Hidemasa Bono
Itoshi Nikaido
Takeya Kasukawa
Yoshihide Hayashizaki
Yasushi Okazaki

First Published June 2, 2003

LETTER

Exploration of Novel Motifs Derived from Mouse cDNA Sequences

Hideya Kawaji
Christian Schönbach
Yo Matsuo
Jun Kawai
Yasushi Okazaki
Yoshihide Hayashizaki
Hideo Matsuda

First Published February 15, 2002

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