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LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
LETTER

Ciona exhibit strong correspondence between evolutionary constraint and functional importance" > Noncoding regulatory sequences of Ciona exhibit strong correspondence between evolutionary constraint and functional importance

  • David S. Johnson
  • Brad Davidson
  • Christopher D. Brown
  • William C. Smith
  • Arend Sidow
  • First Published November 15, 2004
LETTER

The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment

  • Sean M. Grimmond
  • Kevin C. Miranda
  • Zheng Yuan
  • Melissa J. Davis
  • David A. Hume
  • Ken Yagi Naoko Tominaga
  • ... [+2 authors] ...,
  • Hidemasa Bono
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • Rohan D. Teasdale
  • First Published June 2, 2003
LETTER

Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System

  • Stefano Gustincich
  • Serge Batalov
  • Kirk W. Beisel
  • Hidemasa Bono
  • Piero Carninci
  • Colin F. Fletcher Sean Grimmond Nobutaka Hirokawa Erich D. Jarvis Tim Jegla Yuka Kawasawa Julianna LeMieux Harukata Miki Elio Raviola Rohan D. Teasdale Naoko Tominaga
  • ... [+11 authors] ...,
  • Ken Yagi
  • Andreas Zimmer
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • First Published June 2, 2003
LETTER

Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling

  • Itoshi Nikaido
  • Chika Saito
  • Yosuke Mizuno
  • Makiko Meguro
  • Hidemasa Bono
  • Moritoshi Kadomura Tomohiro Kono Gerard A. Morris
  • ... [+3 authors] ...,
  • Paul A. Lyons
  • Mitsuo Oshimura
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • First Published June 2, 2003
LETTER

CDS Annotation in Full-Length cDNA Sequence

  • Masaaki Furuno
  • Takeya Kasukawa
  • Rintaro Saito
  • Jun Adachi
  • Harukazu Suzuki
  • Richard Baldarelli
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • First Published June 2, 2003
LETTER

Systematic Expression Profiling of the Mouse Transcriptome Using RIKEN cDNA Microarrays

  • Hidemasa Bono
  • Ken Yagi
  • Takeya Kasukawa
  • Itoshi Nikaido
  • Naoko Tominaga
  • Rika Miki Yosuke Mizuno Yasuhiro Tomaru Hitoshi Goto Hiroyuki Nitanda Daisuke Shimizu Hirochika Makino Tomoyuki Morita Junshin Fujiyama Takehito Sakai
  • ... [+10 authors] ...,
  • Takashi Shimoji
  • David A. Hume
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • First Published June 2, 2003
LETTER

Antisense Transcripts With FANTOM2 Clone Set and Their Implications for Gene Regulation

  • Hidenori Kiyosawa
  • Itaru Yamanaka
  • Naoki Osato
  • Shinji Kondo
  • Yoshihide Hayashizaki
  • First Published June 2, 2003
LETTER

Comprehensive Analysis of the Mouse Metabolome Based on the Transcriptome

  • Hidemasa Bono
  • Itoshi Nikaido
  • Takeya Kasukawa
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • First Published June 2, 2003
LETTER

Exploration of Novel Motifs Derived from Mouse cDNA Sequences

  • Hideya Kawaji
  • Christian Schönbach
  • Yo Matsuo
  • Jun Kawai
  • Yasushi Okazaki
  • Yoshihide Hayashizaki
  • Hideo Matsuda
  • First Published February 15, 2002
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