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The amphioxus genome illuminates vertebrate origins and cephalochordate biology

Linda Z. Holland
Ricard Albalat
Kaoru Azumi
Èlia Benito-Gutiérrez
Matthew J. Blow
Marianne Bronner-Fraser Frederic Brunet Thomas Butts Simona Candiani Larry J. Dishaw David E.K. Ferrier Jordi Garcia-Fernàndez Jeremy J. Gibson-Brown Carmela Gissi Adam Godzik Finn Hallböök Dan Hirose Kazuyoshi Hosomichi Tetsuro Ikuta Hidetoshi Inoko Masanori Kasahara Jun Kasamatsu Takeshi Kawashima Ayuko Kimura Masaaki Kobayashi Zbynek Kozmik Kaoru Kubokawa Vincent Laudet Gary W. Litman Alice C. McHardy Daniel Meulemans Masaru Nonaka Robert P. Olinski Zeev Pancer Len A. Pennacchio Mario Pestarino Jonathan P. Rast Isidore Rigoutsos Marc Robinson-Rechavi Graeme Roch Hidetoshi Saiga Yasunori Sasakura Masanobu Satake Yutaka Satou Michael Schubert Nancy Sherwood Takashi Shiina Naohito Takatori Javier Tello Pavel Vopalensky Shuichi Wada Anlong Xu Yuzhen Ye Keita Yoshida Fumiko Yoshizaki Jr-Kai Yu Qing Zhang Christian M. Zmasek Pieter J. de Jong Kazutoyo Osoegawa
... [+55 authors] ...,
Nicholas H. Putnam
Daniel S. Rokhsar
Noriyuki Satoh
Peter W.H. Holland

First Published June 18, 2008

Escherichia coli indicates a causative role for A-/AT-tracts" > Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts

Byung-Kwan Cho
Eric M. Knight
Christian L. Barrett
Bernhard Ø. Palsson

First Published March 13, 2008

Systematic condition-dependent annotation of metabolic genes

Tomer Shlomi
Markus Herrgard
Vasiliy Portnoy
Efrat Naim
Bernhard Ø. Palsson
Roded Sharan
Eytan Ruppin

First Published September 25, 2007

Saccharomyces cerevisiae" > Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae

Markus J. Herrgård
Baek-Seok Lee
Vasiliy Portnoy
Bernhard Ø. Palsson

First Published April 10, 2006

Escherichia coli lead to convergent growth phenotypes with different gene expression states" > Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states

Stephen S. Fong
Andrew R. Joyce
Bernhard Ø. Palsson

First Published October 3, 2005

Saccharomyces cerevisiae iND750, a Fully Compartmentalized Genome-Scale Metabolic Model" > Reconstruction and Validation of Saccharomyces cerevisiae iND750, a Fully Compartmentalized Genome-Scale Metabolic Model

Natalie C. Duarte
Markus J. Herrgård
Bernhard Ø. Palsson

First Published June 14, 2004

Saccharomyces cerevisiae Metabolic Network" > Genome-Scale Reconstruction of the Saccharomyces cerevisiae Metabolic Network

Jochen Förster
Iman Famili
Patrick Fu
Bernhard Ø. Palsson
Jens Nielsen

First Published February 1, 2003

Extreme Pathway Lengths and Reaction Participation in Genome-Scale Metabolic Networks

Jason A. Papin
Nathan D. Price
Bernhard Ø. Palsson

First Published December 1, 2002

In Silico Model-Driven Assessment of the Effects of Single Nucleotide Polymorphisms (SNPs) on Human Red Blood Cell Metabolism

Neema Jamshidi
Sharon J. Wiback
Bernhard Ø. Palsson

First Published November 1, 2002

Helicobacter pylori Using Genome-Scale Extreme Pathway Analysis" > Determination of Redundancy and Systems Properties of the Metabolic Network of Helicobacter pylori Using Genome-Scale Extreme Pathway Analysis

Nathan D. Price
Jason A. Papin
Bernhard Ø. Palsson

First Published April 12, 2002