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LETTER

Thylacinus cynocephalus)" > The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)

  • First Published January 12, 2009
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A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome

  • First Published December 3, 2008
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Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

  • First Published December 3, 2008
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H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome

  • First Published December 1, 2008
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Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional implications for MITEs

  • First Published November 26, 2008
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Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

  • First Published November 24, 2008
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Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome

  • First Published November 24, 2008
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Chromosomal instability mediated by non-B DNA: Cruciform conformation and not DNA sequence is responsible for recurrent translocation in humans

  • First Published November 7, 2008
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Arabidopsis differentiation and stress responses" > Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses

  • First Published November 7, 2008
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Widespread balancing selection and pathogen-driven selection at blood group antigen genes

  • First Published November 7, 2008
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Characterization of the bovine pseudoautosomal boundary: Documenting the evolutionary history of mammalian sex chromosomes

  • First Published November 3, 2008
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Oryza sativa" > Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa

  • First Published October 29, 2008
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Comparative sequence analysis of primate subtelomeres originating from a chromosome fission event

  • First Published October 24, 2008
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Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex

  • First Published October 10, 2008
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In-depth characterization of the microRNA transcriptome in a leukemia progression model

  • First Published October 10, 2008
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Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history

  • First Published October 8, 2008
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Alu retrotransposons in the human genome" > Active Alu retrotransposons in the human genome

  • First Published October 3, 2008
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Arabidopsis transposed after the origin of the order Brassicales" > Many or most genes in Arabidopsis transposed after the origin of the order Brassicales

  • First Published October 3, 2008
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E. coli" > Principles of transcriptional regulation and evolution of the metabolic system in E. coli

  • First Published October 3, 2008
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E2F in vivo binding specificity: Comparison of consensus versus nonconsensus binding sites

  • First Published October 3, 2008
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Dispensability of mammalian DNA

  • First Published October 2, 2008
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Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif

  • First Published September 25, 2008
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Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding

  • First Published September 11, 2008
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Unexpected complexity at breakpoint junctions in phenotypically normal individuals and mechanisms involved in generating balanced translocations t(1;22)(p36;q13)

  • First Published September 2, 2008
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HOX gene clusters" > Nucleosome positioning in human HOX gene clusters

  • First Published August 22, 2008
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Pathogen corruption and site-directed recombination at a plant disease resistance gene cluster

  • First Published August 21, 2008
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Copy number variation at the breakpoint region of isochromosome 17q

  • First Published August 19, 2008
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Escherichia coli" > Transcription of foreign DNA in Escherichia coli

  • First Published August 13, 2008
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Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity" > A novel mode of enhancer evolution: The Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity

  • First Published August 7, 2008
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A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains

  • First Published August 7, 2008
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Impacts of protein–protein interaction domains on organism and network complexity

  • First Published August 7, 2008
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NPHP4) is associated with recessive cone-rod dystrophy in standard wire-haired dachshund" > A deletion in nephronophthisis 4 (NPHP4) is associated with recessive cone-rod dystrophy in standard wire-haired dachshund

  • First Published August 7, 2008
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Abundance and length of simple repeats in vertebrate genomes are determined by their structural properties

  • First Published August 7, 2008
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Reduced purifying selection prevails over positive selection in human copy number variant evolution

  • First Published August 7, 2008
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Evolution of the mammalian transcription factor binding repertoire via transposable elements

  • First Published August 5, 2008
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Global organization of replication time zones of the mouse genome

  • First Published July 30, 2008
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Relaxation of yeast mitochondrial functions after whole-genome duplication

  • First Published July 30, 2008
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Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

  • First Published July 24, 2008
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Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement

  • First Published July 14, 2008
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Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5′-seed/ cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes

  • First Published July 9, 2008
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Very small mobile repeated elements in cyanobacterial genomes

  • First Published July 3, 2008
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DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya

  • First Published July 1, 2008
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Drosophila melanogaster" > Accelerated sequence divergence of conserved genomic elements in Drosophila melanogaster

  • First Published June 26, 2008
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Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways" > Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways

  • First Published June 26, 2008
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Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation

  • First Published June 18, 2008
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Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes

  • First Published June 18, 2008
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The amphioxus genome illuminates vertebrate origins and cephalochordate biology

  • First Published June 18, 2008
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Insights from the amphioxus genome on the origin of vertebrate neural crest

  • First Published June 18, 2008
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